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Development and evaluation of microsatellite markers for the gynodioecious shrub Daphne jezoensis (Thymelaeaceae)(1)

• Premise of the study: Ten microsatellite markers were developed and characterized in a gynodioecious summer-deciduous shrub, Daphne jezoensis, to facilitate studies of the evolution of gynodioecy in the species. • Methods and Results: We used a next-generation sequencing approach with the Ion Pers...

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Autores principales: Kameyama, Yoshiaki, Hirao, Akira S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103110/
https://www.ncbi.nlm.nih.gov/pubmed/25202624
http://dx.doi.org/10.3732/apps.1400001
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author Kameyama, Yoshiaki
Hirao, Akira S.
author_facet Kameyama, Yoshiaki
Hirao, Akira S.
author_sort Kameyama, Yoshiaki
collection PubMed
description • Premise of the study: Ten microsatellite markers were developed and characterized in a gynodioecious summer-deciduous shrub, Daphne jezoensis, to facilitate studies of the evolution of gynodioecy in the species. • Methods and Results: We used a next-generation sequencing approach with the Ion Personal Genome Machine (PGM) system to identify and develop microsatellite markers with perfect di- and trinucleotide repeats. These markers were tested with 47 samples from two natural populations. The mean observed and expected heterozygosities per population ranged from 0.40 to 0.46 and 0.60 to 0.66, respectively. • Conclusions: The developed markers will be useful to study the mating system, gene flow, and population genetic structure of D. jezoensis.
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spelling pubmed-41031102014-09-08 Development and evaluation of microsatellite markers for the gynodioecious shrub Daphne jezoensis (Thymelaeaceae)(1) Kameyama, Yoshiaki Hirao, Akira S. Appl Plant Sci Primer Note • Premise of the study: Ten microsatellite markers were developed and characterized in a gynodioecious summer-deciduous shrub, Daphne jezoensis, to facilitate studies of the evolution of gynodioecy in the species. • Methods and Results: We used a next-generation sequencing approach with the Ion Personal Genome Machine (PGM) system to identify and develop microsatellite markers with perfect di- and trinucleotide repeats. These markers were tested with 47 samples from two natural populations. The mean observed and expected heterozygosities per population ranged from 0.40 to 0.46 and 0.60 to 0.66, respectively. • Conclusions: The developed markers will be useful to study the mating system, gene flow, and population genetic structure of D. jezoensis. Botanical Society of America 2014-04-18 /pmc/articles/PMC4103110/ /pubmed/25202624 http://dx.doi.org/10.3732/apps.1400001 Text en © 2014 Kameyama and Hirao. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA).
spellingShingle Primer Note
Kameyama, Yoshiaki
Hirao, Akira S.
Development and evaluation of microsatellite markers for the gynodioecious shrub Daphne jezoensis (Thymelaeaceae)(1)
title Development and evaluation of microsatellite markers for the gynodioecious shrub Daphne jezoensis (Thymelaeaceae)(1)
title_full Development and evaluation of microsatellite markers for the gynodioecious shrub Daphne jezoensis (Thymelaeaceae)(1)
title_fullStr Development and evaluation of microsatellite markers for the gynodioecious shrub Daphne jezoensis (Thymelaeaceae)(1)
title_full_unstemmed Development and evaluation of microsatellite markers for the gynodioecious shrub Daphne jezoensis (Thymelaeaceae)(1)
title_short Development and evaluation of microsatellite markers for the gynodioecious shrub Daphne jezoensis (Thymelaeaceae)(1)
title_sort development and evaluation of microsatellite markers for the gynodioecious shrub daphne jezoensis (thymelaeaceae)(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103110/
https://www.ncbi.nlm.nih.gov/pubmed/25202624
http://dx.doi.org/10.3732/apps.1400001
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