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Development of microsatellite loci in Artocarpus altilis (Moraceae) and cross-amplification in congeneric species(1)

• Premise of the study: Microsatellite loci were isolated and characterized from enriched genomic libraries of Artocarpus altilis (breadfruit) and tested in four Artocarpus species and one hybrid. The microsatellite markers provide new tools for further studies in Artocarpus. • Methods and Results:...

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Autores principales: Witherup, Colby, Ragone, Diane, Wiesner-Hanks, Tyr, Irish, Brian, Scheffler, Brian, Simpson, Sheron, Zee, Francis, Zuberi, M. Iqbal, Zerega, Nyree J. C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103128/
https://www.ncbi.nlm.nih.gov/pubmed/25202565
http://dx.doi.org/10.3732/apps.1200423
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author Witherup, Colby
Ragone, Diane
Wiesner-Hanks, Tyr
Irish, Brian
Scheffler, Brian
Simpson, Sheron
Zee, Francis
Zuberi, M. Iqbal
Zerega, Nyree J. C.
author_facet Witherup, Colby
Ragone, Diane
Wiesner-Hanks, Tyr
Irish, Brian
Scheffler, Brian
Simpson, Sheron
Zee, Francis
Zuberi, M. Iqbal
Zerega, Nyree J. C.
author_sort Witherup, Colby
collection PubMed
description • Premise of the study: Microsatellite loci were isolated and characterized from enriched genomic libraries of Artocarpus altilis (breadfruit) and tested in four Artocarpus species and one hybrid. The microsatellite markers provide new tools for further studies in Artocarpus. • Methods and Results: A total of 25 microsatellite loci were evaluated across four Artocarpus species and one hybrid. Twenty-one microsatellite loci were evaluated on A. altilis (241), A. camansi (34), A. mariannensis (15), and A. altilis × mariannensis (64) samples. Nine of those loci plus four additional loci were evaluated on A. heterophyllus (jackfruit, 426) samples. All loci are polymorphic for at least one species. The average number of alleles ranges from two to nine within taxa. • Conclusions: These microsatellite primers will facilitate further studies on the genetic structure and evolutionary and domestication history of Artocarpus species. They will aid in cultivar identification and establishing germplasm conservation strategies for breadfruit and jackfruit.
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spelling pubmed-41031282014-09-08 Development of microsatellite loci in Artocarpus altilis (Moraceae) and cross-amplification in congeneric species(1) Witherup, Colby Ragone, Diane Wiesner-Hanks, Tyr Irish, Brian Scheffler, Brian Simpson, Sheron Zee, Francis Zuberi, M. Iqbal Zerega, Nyree J. C. Appl Plant Sci Primer Note • Premise of the study: Microsatellite loci were isolated and characterized from enriched genomic libraries of Artocarpus altilis (breadfruit) and tested in four Artocarpus species and one hybrid. The microsatellite markers provide new tools for further studies in Artocarpus. • Methods and Results: A total of 25 microsatellite loci were evaluated across four Artocarpus species and one hybrid. Twenty-one microsatellite loci were evaluated on A. altilis (241), A. camansi (34), A. mariannensis (15), and A. altilis × mariannensis (64) samples. Nine of those loci plus four additional loci were evaluated on A. heterophyllus (jackfruit, 426) samples. All loci are polymorphic for at least one species. The average number of alleles ranges from two to nine within taxa. • Conclusions: These microsatellite primers will facilitate further studies on the genetic structure and evolutionary and domestication history of Artocarpus species. They will aid in cultivar identification and establishing germplasm conservation strategies for breadfruit and jackfruit. Botanical Society of America 2013-06-21 /pmc/articles/PMC4103128/ /pubmed/25202565 http://dx.doi.org/10.3732/apps.1200423 Text en © 2013 Botanical Society of America
spellingShingle Primer Note
Witherup, Colby
Ragone, Diane
Wiesner-Hanks, Tyr
Irish, Brian
Scheffler, Brian
Simpson, Sheron
Zee, Francis
Zuberi, M. Iqbal
Zerega, Nyree J. C.
Development of microsatellite loci in Artocarpus altilis (Moraceae) and cross-amplification in congeneric species(1)
title Development of microsatellite loci in Artocarpus altilis (Moraceae) and cross-amplification in congeneric species(1)
title_full Development of microsatellite loci in Artocarpus altilis (Moraceae) and cross-amplification in congeneric species(1)
title_fullStr Development of microsatellite loci in Artocarpus altilis (Moraceae) and cross-amplification in congeneric species(1)
title_full_unstemmed Development of microsatellite loci in Artocarpus altilis (Moraceae) and cross-amplification in congeneric species(1)
title_short Development of microsatellite loci in Artocarpus altilis (Moraceae) and cross-amplification in congeneric species(1)
title_sort development of microsatellite loci in artocarpus altilis (moraceae) and cross-amplification in congeneric species(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103128/
https://www.ncbi.nlm.nih.gov/pubmed/25202565
http://dx.doi.org/10.3732/apps.1200423
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