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Development of microsatellite loci in Artocarpus altilis (Moraceae) and cross-amplification in congeneric species(1)
• Premise of the study: Microsatellite loci were isolated and characterized from enriched genomic libraries of Artocarpus altilis (breadfruit) and tested in four Artocarpus species and one hybrid. The microsatellite markers provide new tools for further studies in Artocarpus. • Methods and Results:...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103128/ https://www.ncbi.nlm.nih.gov/pubmed/25202565 http://dx.doi.org/10.3732/apps.1200423 |
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author | Witherup, Colby Ragone, Diane Wiesner-Hanks, Tyr Irish, Brian Scheffler, Brian Simpson, Sheron Zee, Francis Zuberi, M. Iqbal Zerega, Nyree J. C. |
author_facet | Witherup, Colby Ragone, Diane Wiesner-Hanks, Tyr Irish, Brian Scheffler, Brian Simpson, Sheron Zee, Francis Zuberi, M. Iqbal Zerega, Nyree J. C. |
author_sort | Witherup, Colby |
collection | PubMed |
description | • Premise of the study: Microsatellite loci were isolated and characterized from enriched genomic libraries of Artocarpus altilis (breadfruit) and tested in four Artocarpus species and one hybrid. The microsatellite markers provide new tools for further studies in Artocarpus. • Methods and Results: A total of 25 microsatellite loci were evaluated across four Artocarpus species and one hybrid. Twenty-one microsatellite loci were evaluated on A. altilis (241), A. camansi (34), A. mariannensis (15), and A. altilis × mariannensis (64) samples. Nine of those loci plus four additional loci were evaluated on A. heterophyllus (jackfruit, 426) samples. All loci are polymorphic for at least one species. The average number of alleles ranges from two to nine within taxa. • Conclusions: These microsatellite primers will facilitate further studies on the genetic structure and evolutionary and domestication history of Artocarpus species. They will aid in cultivar identification and establishing germplasm conservation strategies for breadfruit and jackfruit. |
format | Online Article Text |
id | pubmed-4103128 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-41031282014-09-08 Development of microsatellite loci in Artocarpus altilis (Moraceae) and cross-amplification in congeneric species(1) Witherup, Colby Ragone, Diane Wiesner-Hanks, Tyr Irish, Brian Scheffler, Brian Simpson, Sheron Zee, Francis Zuberi, M. Iqbal Zerega, Nyree J. C. Appl Plant Sci Primer Note • Premise of the study: Microsatellite loci were isolated and characterized from enriched genomic libraries of Artocarpus altilis (breadfruit) and tested in four Artocarpus species and one hybrid. The microsatellite markers provide new tools for further studies in Artocarpus. • Methods and Results: A total of 25 microsatellite loci were evaluated across four Artocarpus species and one hybrid. Twenty-one microsatellite loci were evaluated on A. altilis (241), A. camansi (34), A. mariannensis (15), and A. altilis × mariannensis (64) samples. Nine of those loci plus four additional loci were evaluated on A. heterophyllus (jackfruit, 426) samples. All loci are polymorphic for at least one species. The average number of alleles ranges from two to nine within taxa. • Conclusions: These microsatellite primers will facilitate further studies on the genetic structure and evolutionary and domestication history of Artocarpus species. They will aid in cultivar identification and establishing germplasm conservation strategies for breadfruit and jackfruit. Botanical Society of America 2013-06-21 /pmc/articles/PMC4103128/ /pubmed/25202565 http://dx.doi.org/10.3732/apps.1200423 Text en © 2013 Botanical Society of America |
spellingShingle | Primer Note Witherup, Colby Ragone, Diane Wiesner-Hanks, Tyr Irish, Brian Scheffler, Brian Simpson, Sheron Zee, Francis Zuberi, M. Iqbal Zerega, Nyree J. C. Development of microsatellite loci in Artocarpus altilis (Moraceae) and cross-amplification in congeneric species(1) |
title | Development of microsatellite loci in Artocarpus altilis (Moraceae) and cross-amplification in congeneric species(1) |
title_full | Development of microsatellite loci in Artocarpus altilis (Moraceae) and cross-amplification in congeneric species(1) |
title_fullStr | Development of microsatellite loci in Artocarpus altilis (Moraceae) and cross-amplification in congeneric species(1) |
title_full_unstemmed | Development of microsatellite loci in Artocarpus altilis (Moraceae) and cross-amplification in congeneric species(1) |
title_short | Development of microsatellite loci in Artocarpus altilis (Moraceae) and cross-amplification in congeneric species(1) |
title_sort | development of microsatellite loci in artocarpus altilis (moraceae) and cross-amplification in congeneric species(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103128/ https://www.ncbi.nlm.nih.gov/pubmed/25202565 http://dx.doi.org/10.3732/apps.1200423 |
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