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Isolation and characterization of nine polymorphic microsatellite loci in Piper solmsianum (piperaceae)(1)

• Premise of the study: Nine microsatellite (simple sequence repeat [SSR]) loci were characterized for natural populations of Piper solmsianum, a potential source of bioactive secondary metabolites, and analyzed to assess the levels of genetic diversity in this species. • Methods and Results: Based...

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Autores principales: Yoshida, Nídia C., Lima, Paula F., Priolli, Regina H. G., Kato, Massuo J., Colombo, Carlos A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103135/
https://www.ncbi.nlm.nih.gov/pubmed/25202616
http://dx.doi.org/10.3732/apps.1300092
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author Yoshida, Nídia C.
Lima, Paula F.
Priolli, Regina H. G.
Kato, Massuo J.
Colombo, Carlos A.
author_facet Yoshida, Nídia C.
Lima, Paula F.
Priolli, Regina H. G.
Kato, Massuo J.
Colombo, Carlos A.
author_sort Yoshida, Nídia C.
collection PubMed
description • Premise of the study: Nine microsatellite (simple sequence repeat [SSR]) loci were characterized for natural populations of Piper solmsianum, a potential source of bioactive secondary metabolites, and analyzed to assess the levels of genetic diversity in this species. • Methods and Results: Based on an enriched library using the oligonucleotides (CT)(8) and (GT)(8), a total of 19 pairs of SSR primers were designed and nine of them were highly polymorphic after screening of 37 specimens from two populations. The number of alleles per locus ranged from one to six while the observed heterozygosity for polymorphic loci ranged from 0.000 to 0.875. • Conclusions: The SSR regions characterized were informative, and the genetic markers will be useful to assess the genetic diversity and gene flow in populations of P. solmsianum.
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spelling pubmed-41031352014-09-08 Isolation and characterization of nine polymorphic microsatellite loci in Piper solmsianum (piperaceae)(1) Yoshida, Nídia C. Lima, Paula F. Priolli, Regina H. G. Kato, Massuo J. Colombo, Carlos A. Appl Plant Sci Primer Note • Premise of the study: Nine microsatellite (simple sequence repeat [SSR]) loci were characterized for natural populations of Piper solmsianum, a potential source of bioactive secondary metabolites, and analyzed to assess the levels of genetic diversity in this species. • Methods and Results: Based on an enriched library using the oligonucleotides (CT)(8) and (GT)(8), a total of 19 pairs of SSR primers were designed and nine of them were highly polymorphic after screening of 37 specimens from two populations. The number of alleles per locus ranged from one to six while the observed heterozygosity for polymorphic loci ranged from 0.000 to 0.875. • Conclusions: The SSR regions characterized were informative, and the genetic markers will be useful to assess the genetic diversity and gene flow in populations of P. solmsianum. Botanical Society of America 2014-04-04 /pmc/articles/PMC4103135/ /pubmed/25202616 http://dx.doi.org/10.3732/apps.1300092 Text en © 2014 Yoshida et al. Published by the Botanical Society of America, Inc. http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA).
spellingShingle Primer Note
Yoshida, Nídia C.
Lima, Paula F.
Priolli, Regina H. G.
Kato, Massuo J.
Colombo, Carlos A.
Isolation and characterization of nine polymorphic microsatellite loci in Piper solmsianum (piperaceae)(1)
title Isolation and characterization of nine polymorphic microsatellite loci in Piper solmsianum (piperaceae)(1)
title_full Isolation and characterization of nine polymorphic microsatellite loci in Piper solmsianum (piperaceae)(1)
title_fullStr Isolation and characterization of nine polymorphic microsatellite loci in Piper solmsianum (piperaceae)(1)
title_full_unstemmed Isolation and characterization of nine polymorphic microsatellite loci in Piper solmsianum (piperaceae)(1)
title_short Isolation and characterization of nine polymorphic microsatellite loci in Piper solmsianum (piperaceae)(1)
title_sort isolation and characterization of nine polymorphic microsatellite loci in piper solmsianum (piperaceae)(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103135/
https://www.ncbi.nlm.nih.gov/pubmed/25202616
http://dx.doi.org/10.3732/apps.1300092
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