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Isolation and characterization of nine polymorphic microsatellite loci in Piper solmsianum (piperaceae)(1)
• Premise of the study: Nine microsatellite (simple sequence repeat [SSR]) loci were characterized for natural populations of Piper solmsianum, a potential source of bioactive secondary metabolites, and analyzed to assess the levels of genetic diversity in this species. • Methods and Results: Based...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103135/ https://www.ncbi.nlm.nih.gov/pubmed/25202616 http://dx.doi.org/10.3732/apps.1300092 |
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author | Yoshida, Nídia C. Lima, Paula F. Priolli, Regina H. G. Kato, Massuo J. Colombo, Carlos A. |
author_facet | Yoshida, Nídia C. Lima, Paula F. Priolli, Regina H. G. Kato, Massuo J. Colombo, Carlos A. |
author_sort | Yoshida, Nídia C. |
collection | PubMed |
description | • Premise of the study: Nine microsatellite (simple sequence repeat [SSR]) loci were characterized for natural populations of Piper solmsianum, a potential source of bioactive secondary metabolites, and analyzed to assess the levels of genetic diversity in this species. • Methods and Results: Based on an enriched library using the oligonucleotides (CT)(8) and (GT)(8), a total of 19 pairs of SSR primers were designed and nine of them were highly polymorphic after screening of 37 specimens from two populations. The number of alleles per locus ranged from one to six while the observed heterozygosity for polymorphic loci ranged from 0.000 to 0.875. • Conclusions: The SSR regions characterized were informative, and the genetic markers will be useful to assess the genetic diversity and gene flow in populations of P. solmsianum. |
format | Online Article Text |
id | pubmed-4103135 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-41031352014-09-08 Isolation and characterization of nine polymorphic microsatellite loci in Piper solmsianum (piperaceae)(1) Yoshida, Nídia C. Lima, Paula F. Priolli, Regina H. G. Kato, Massuo J. Colombo, Carlos A. Appl Plant Sci Primer Note • Premise of the study: Nine microsatellite (simple sequence repeat [SSR]) loci were characterized for natural populations of Piper solmsianum, a potential source of bioactive secondary metabolites, and analyzed to assess the levels of genetic diversity in this species. • Methods and Results: Based on an enriched library using the oligonucleotides (CT)(8) and (GT)(8), a total of 19 pairs of SSR primers were designed and nine of them were highly polymorphic after screening of 37 specimens from two populations. The number of alleles per locus ranged from one to six while the observed heterozygosity for polymorphic loci ranged from 0.000 to 0.875. • Conclusions: The SSR regions characterized were informative, and the genetic markers will be useful to assess the genetic diversity and gene flow in populations of P. solmsianum. Botanical Society of America 2014-04-04 /pmc/articles/PMC4103135/ /pubmed/25202616 http://dx.doi.org/10.3732/apps.1300092 Text en © 2014 Yoshida et al. Published by the Botanical Society of America, Inc. http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA). |
spellingShingle | Primer Note Yoshida, Nídia C. Lima, Paula F. Priolli, Regina H. G. Kato, Massuo J. Colombo, Carlos A. Isolation and characterization of nine polymorphic microsatellite loci in Piper solmsianum (piperaceae)(1) |
title | Isolation and characterization of nine polymorphic microsatellite loci in Piper solmsianum (piperaceae)(1) |
title_full | Isolation and characterization of nine polymorphic microsatellite loci in Piper solmsianum (piperaceae)(1) |
title_fullStr | Isolation and characterization of nine polymorphic microsatellite loci in Piper solmsianum (piperaceae)(1) |
title_full_unstemmed | Isolation and characterization of nine polymorphic microsatellite loci in Piper solmsianum (piperaceae)(1) |
title_short | Isolation and characterization of nine polymorphic microsatellite loci in Piper solmsianum (piperaceae)(1) |
title_sort | isolation and characterization of nine polymorphic microsatellite loci in piper solmsianum (piperaceae)(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103135/ https://www.ncbi.nlm.nih.gov/pubmed/25202616 http://dx.doi.org/10.3732/apps.1300092 |
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