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Development of polymorphic microsatellite markers for Indian tobacco, Lobelia inflata (Campanulaceae)(1)
• Premise of the study: Nuclear microsatellite markers were developed for Lobelia inflata (Campanulaceae), an obligately self-fertilizing plant species, for use in the study of temporal fluctuation in allele frequency and of the genetic structure within and among populations. • Methods and Results:...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103137/ https://www.ncbi.nlm.nih.gov/pubmed/25202618 http://dx.doi.org/10.3732/apps.1300096 |
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author | Hughes, P. William Jaworski, Allison F. Davis, Corey S. Aitken, Susan M. Simons, Andrew M. |
author_facet | Hughes, P. William Jaworski, Allison F. Davis, Corey S. Aitken, Susan M. Simons, Andrew M. |
author_sort | Hughes, P. William |
collection | PubMed |
description | • Premise of the study: Nuclear microsatellite markers were developed for Lobelia inflata (Campanulaceae), an obligately self-fertilizing plant species, for use in the study of temporal fluctuation in allele frequency and of the genetic structure within and among populations. • Methods and Results: We developed 28 primer pairs for L. inflata, all of which amplify CT dinucleotide repeats. We evaluated amplification of these loci in 53 L. inflata individuals at three sites in eastern North America and found that 24 loci showed microsatellite polymorphism. We also found that 16 loci amplified successfully in L. cardinalis, and 11 amplified successfully in L. siphilitica. • Conclusions: These primers will be useful for assessing allelic diversity within and among populations of L. inflata, and show potential for use in congeneric species. |
format | Online Article Text |
id | pubmed-4103137 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-41031372014-09-08 Development of polymorphic microsatellite markers for Indian tobacco, Lobelia inflata (Campanulaceae)(1) Hughes, P. William Jaworski, Allison F. Davis, Corey S. Aitken, Susan M. Simons, Andrew M. Appl Plant Sci Primer Note • Premise of the study: Nuclear microsatellite markers were developed for Lobelia inflata (Campanulaceae), an obligately self-fertilizing plant species, for use in the study of temporal fluctuation in allele frequency and of the genetic structure within and among populations. • Methods and Results: We developed 28 primer pairs for L. inflata, all of which amplify CT dinucleotide repeats. We evaluated amplification of these loci in 53 L. inflata individuals at three sites in eastern North America and found that 24 loci showed microsatellite polymorphism. We also found that 16 loci amplified successfully in L. cardinalis, and 11 amplified successfully in L. siphilitica. • Conclusions: These primers will be useful for assessing allelic diversity within and among populations of L. inflata, and show potential for use in congeneric species. Botanical Society of America 2014-04-04 /pmc/articles/PMC4103137/ /pubmed/25202618 http://dx.doi.org/10.3732/apps.1300096 Text en © 2014 Hughes et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA). |
spellingShingle | Primer Note Hughes, P. William Jaworski, Allison F. Davis, Corey S. Aitken, Susan M. Simons, Andrew M. Development of polymorphic microsatellite markers for Indian tobacco, Lobelia inflata (Campanulaceae)(1) |
title | Development of polymorphic microsatellite markers for Indian tobacco, Lobelia inflata (Campanulaceae)(1) |
title_full | Development of polymorphic microsatellite markers for Indian tobacco, Lobelia inflata (Campanulaceae)(1) |
title_fullStr | Development of polymorphic microsatellite markers for Indian tobacco, Lobelia inflata (Campanulaceae)(1) |
title_full_unstemmed | Development of polymorphic microsatellite markers for Indian tobacco, Lobelia inflata (Campanulaceae)(1) |
title_short | Development of polymorphic microsatellite markers for Indian tobacco, Lobelia inflata (Campanulaceae)(1) |
title_sort | development of polymorphic microsatellite markers for indian tobacco, lobelia inflata (campanulaceae)(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103137/ https://www.ncbi.nlm.nih.gov/pubmed/25202618 http://dx.doi.org/10.3732/apps.1300096 |
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