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Development of microsatellites in Labisia pumila (Myrsinaceae), an economically important Malaysian herb(1)
• Premise of the study: The exploitation of Labisia pumila for commercial demand is gradually increasing. It is therefore important that conservation is prioritized to ensure sustainable utilization. We developed microsatellites for L. pumila var. alata and evaluated their polymorphism across var. a...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103438/ https://www.ncbi.nlm.nih.gov/pubmed/25202631 http://dx.doi.org/10.3732/apps.1400019 |
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author | Tnah, Lee Hong Lee, Chai Ting Lee, Soon Leong Ng, Chin Hong Ng, Kevin Kit Siong |
author_facet | Tnah, Lee Hong Lee, Chai Ting Lee, Soon Leong Ng, Chin Hong Ng, Kevin Kit Siong |
author_sort | Tnah, Lee Hong |
collection | PubMed |
description | • Premise of the study: The exploitation of Labisia pumila for commercial demand is gradually increasing. It is therefore important that conservation is prioritized to ensure sustainable utilization. We developed microsatellites for L. pumila var. alata and evaluated their polymorphism across var. alata, var. pumila, and var. lanceolata. • Methods and Results: Ten polymorphic microsatellites of L. pumila were developed using the magnetic bead hybridization selection approach. A total of 84, 48, and 66 alleles were observed in L. pumila var. alata, var. pumila, and var. lanceolata, respectively. The species is likely a tetraploid, with the majority of the loci exhibiting up to four alleles per individual. • Conclusions: This is the first report on the development of microsatellites in L. pumila. The microsatellites will provide a good basis for investigating the population genetics of the species and will serve as a useful tool for DNA profiling. |
format | Online Article Text |
id | pubmed-4103438 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-41034382014-09-08 Development of microsatellites in Labisia pumila (Myrsinaceae), an economically important Malaysian herb(1) Tnah, Lee Hong Lee, Chai Ting Lee, Soon Leong Ng, Chin Hong Ng, Kevin Kit Siong Appl Plant Sci Primer Note • Premise of the study: The exploitation of Labisia pumila for commercial demand is gradually increasing. It is therefore important that conservation is prioritized to ensure sustainable utilization. We developed microsatellites for L. pumila var. alata and evaluated their polymorphism across var. alata, var. pumila, and var. lanceolata. • Methods and Results: Ten polymorphic microsatellites of L. pumila were developed using the magnetic bead hybridization selection approach. A total of 84, 48, and 66 alleles were observed in L. pumila var. alata, var. pumila, and var. lanceolata, respectively. The species is likely a tetraploid, with the majority of the loci exhibiting up to four alleles per individual. • Conclusions: This is the first report on the development of microsatellites in L. pumila. The microsatellites will provide a good basis for investigating the population genetics of the species and will serve as a useful tool for DNA profiling. Botanical Society of America 2014-06-04 /pmc/articles/PMC4103438/ /pubmed/25202631 http://dx.doi.org/10.3732/apps.1400019 Text en © 2014 Tnah et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA). |
spellingShingle | Primer Note Tnah, Lee Hong Lee, Chai Ting Lee, Soon Leong Ng, Chin Hong Ng, Kevin Kit Siong Development of microsatellites in Labisia pumila (Myrsinaceae), an economically important Malaysian herb(1) |
title | Development of microsatellites in Labisia pumila (Myrsinaceae), an economically important Malaysian herb(1) |
title_full | Development of microsatellites in Labisia pumila (Myrsinaceae), an economically important Malaysian herb(1) |
title_fullStr | Development of microsatellites in Labisia pumila (Myrsinaceae), an economically important Malaysian herb(1) |
title_full_unstemmed | Development of microsatellites in Labisia pumila (Myrsinaceae), an economically important Malaysian herb(1) |
title_short | Development of microsatellites in Labisia pumila (Myrsinaceae), an economically important Malaysian herb(1) |
title_sort | development of microsatellites in labisia pumila (myrsinaceae), an economically important malaysian herb(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103438/ https://www.ncbi.nlm.nih.gov/pubmed/25202631 http://dx.doi.org/10.3732/apps.1400019 |
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