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Development of microsatellites in Labisia pumila (Myrsinaceae), an economically important Malaysian herb(1)

• Premise of the study: The exploitation of Labisia pumila for commercial demand is gradually increasing. It is therefore important that conservation is prioritized to ensure sustainable utilization. We developed microsatellites for L. pumila var. alata and evaluated their polymorphism across var. a...

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Detalles Bibliográficos
Autores principales: Tnah, Lee Hong, Lee, Chai Ting, Lee, Soon Leong, Ng, Chin Hong, Ng, Kevin Kit Siong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103438/
https://www.ncbi.nlm.nih.gov/pubmed/25202631
http://dx.doi.org/10.3732/apps.1400019
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author Tnah, Lee Hong
Lee, Chai Ting
Lee, Soon Leong
Ng, Chin Hong
Ng, Kevin Kit Siong
author_facet Tnah, Lee Hong
Lee, Chai Ting
Lee, Soon Leong
Ng, Chin Hong
Ng, Kevin Kit Siong
author_sort Tnah, Lee Hong
collection PubMed
description • Premise of the study: The exploitation of Labisia pumila for commercial demand is gradually increasing. It is therefore important that conservation is prioritized to ensure sustainable utilization. We developed microsatellites for L. pumila var. alata and evaluated their polymorphism across var. alata, var. pumila, and var. lanceolata. • Methods and Results: Ten polymorphic microsatellites of L. pumila were developed using the magnetic bead hybridization selection approach. A total of 84, 48, and 66 alleles were observed in L. pumila var. alata, var. pumila, and var. lanceolata, respectively. The species is likely a tetraploid, with the majority of the loci exhibiting up to four alleles per individual. • Conclusions: This is the first report on the development of microsatellites in L. pumila. The microsatellites will provide a good basis for investigating the population genetics of the species and will serve as a useful tool for DNA profiling.
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spelling pubmed-41034382014-09-08 Development of microsatellites in Labisia pumila (Myrsinaceae), an economically important Malaysian herb(1) Tnah, Lee Hong Lee, Chai Ting Lee, Soon Leong Ng, Chin Hong Ng, Kevin Kit Siong Appl Plant Sci Primer Note • Premise of the study: The exploitation of Labisia pumila for commercial demand is gradually increasing. It is therefore important that conservation is prioritized to ensure sustainable utilization. We developed microsatellites for L. pumila var. alata and evaluated their polymorphism across var. alata, var. pumila, and var. lanceolata. • Methods and Results: Ten polymorphic microsatellites of L. pumila were developed using the magnetic bead hybridization selection approach. A total of 84, 48, and 66 alleles were observed in L. pumila var. alata, var. pumila, and var. lanceolata, respectively. The species is likely a tetraploid, with the majority of the loci exhibiting up to four alleles per individual. • Conclusions: This is the first report on the development of microsatellites in L. pumila. The microsatellites will provide a good basis for investigating the population genetics of the species and will serve as a useful tool for DNA profiling. Botanical Society of America 2014-06-04 /pmc/articles/PMC4103438/ /pubmed/25202631 http://dx.doi.org/10.3732/apps.1400019 Text en © 2014 Tnah et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA).
spellingShingle Primer Note
Tnah, Lee Hong
Lee, Chai Ting
Lee, Soon Leong
Ng, Chin Hong
Ng, Kevin Kit Siong
Development of microsatellites in Labisia pumila (Myrsinaceae), an economically important Malaysian herb(1)
title Development of microsatellites in Labisia pumila (Myrsinaceae), an economically important Malaysian herb(1)
title_full Development of microsatellites in Labisia pumila (Myrsinaceae), an economically important Malaysian herb(1)
title_fullStr Development of microsatellites in Labisia pumila (Myrsinaceae), an economically important Malaysian herb(1)
title_full_unstemmed Development of microsatellites in Labisia pumila (Myrsinaceae), an economically important Malaysian herb(1)
title_short Development of microsatellites in Labisia pumila (Myrsinaceae), an economically important Malaysian herb(1)
title_sort development of microsatellites in labisia pumila (myrsinaceae), an economically important malaysian herb(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103438/
https://www.ncbi.nlm.nih.gov/pubmed/25202631
http://dx.doi.org/10.3732/apps.1400019
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