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Development of 16 microsatellite markers within the Camassia (Agavaceae) species complex and amplification in related taxa(1)
• Premise of the study: The North American genus Camassia is an ecologically important group whose variability and evolution are little understood, being influenced by hybridization and geographic isolation. We developed microsatellite markers to investigate patterns of gene flow, population structu...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103445/ https://www.ncbi.nlm.nih.gov/pubmed/25202572 http://dx.doi.org/10.3732/apps.1300001 |
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author | Culley, Theresa M. Leng, Ju-Fang Kephart, Susan R. Cartieri, Francis J. Theiss, Kathryn E. |
author_facet | Culley, Theresa M. Leng, Ju-Fang Kephart, Susan R. Cartieri, Francis J. Theiss, Kathryn E. |
author_sort | Culley, Theresa M. |
collection | PubMed |
description | • Premise of the study: The North American genus Camassia is an ecologically important group whose variability and evolution are little understood, being influenced by hybridization and geographic isolation. We developed microsatellite markers to investigate patterns of gene flow, population structure, and taxonomic relationships within this group. • Methods and Results: Using a traditional approach with biotin-labeled probes, we developed 16 microsatellite primers in three species of Camassia: C. howellii, C. leichtlinii, and C. quamash. The number of alleles per locus averaged 3.94 per species, and levels of heterozygosity ranged from 0.000 to 1.00 and 0.033 to 0.917 for observed and expected heterozygosities, respectively. All primers amplified to varying extents in additional species (C. angusta, C. cusickii, C. scilloides) and in putative species in a related genus (Hastingsia alba, H. atropurpurea, H. bracteosa, H. serpentinicola). • Conclusions: These microsatellite markers exhibit variation and are useful for ongoing studies of integrative taxonomy and population differentiation within this species complex. |
format | Online Article Text |
id | pubmed-4103445 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-41034452014-09-08 Development of 16 microsatellite markers within the Camassia (Agavaceae) species complex and amplification in related taxa(1) Culley, Theresa M. Leng, Ju-Fang Kephart, Susan R. Cartieri, Francis J. Theiss, Kathryn E. Appl Plant Sci Primer Note • Premise of the study: The North American genus Camassia is an ecologically important group whose variability and evolution are little understood, being influenced by hybridization and geographic isolation. We developed microsatellite markers to investigate patterns of gene flow, population structure, and taxonomic relationships within this group. • Methods and Results: Using a traditional approach with biotin-labeled probes, we developed 16 microsatellite primers in three species of Camassia: C. howellii, C. leichtlinii, and C. quamash. The number of alleles per locus averaged 3.94 per species, and levels of heterozygosity ranged from 0.000 to 1.00 and 0.033 to 0.917 for observed and expected heterozygosities, respectively. All primers amplified to varying extents in additional species (C. angusta, C. cusickii, C. scilloides) and in putative species in a related genus (Hastingsia alba, H. atropurpurea, H. bracteosa, H. serpentinicola). • Conclusions: These microsatellite markers exhibit variation and are useful for ongoing studies of integrative taxonomy and population differentiation within this species complex. Botanical Society of America 2013-07-22 /pmc/articles/PMC4103445/ /pubmed/25202572 http://dx.doi.org/10.3732/apps.1300001 Text en © 2013 Culley et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA). |
spellingShingle | Primer Note Culley, Theresa M. Leng, Ju-Fang Kephart, Susan R. Cartieri, Francis J. Theiss, Kathryn E. Development of 16 microsatellite markers within the Camassia (Agavaceae) species complex and amplification in related taxa(1) |
title | Development of 16 microsatellite markers within the Camassia (Agavaceae) species complex and amplification in related taxa(1) |
title_full | Development of 16 microsatellite markers within the Camassia (Agavaceae) species complex and amplification in related taxa(1) |
title_fullStr | Development of 16 microsatellite markers within the Camassia (Agavaceae) species complex and amplification in related taxa(1) |
title_full_unstemmed | Development of 16 microsatellite markers within the Camassia (Agavaceae) species complex and amplification in related taxa(1) |
title_short | Development of 16 microsatellite markers within the Camassia (Agavaceae) species complex and amplification in related taxa(1) |
title_sort | development of 16 microsatellite markers within the camassia (agavaceae) species complex and amplification in related taxa(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103445/ https://www.ncbi.nlm.nih.gov/pubmed/25202572 http://dx.doi.org/10.3732/apps.1300001 |
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