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Development of microsatellites for Verbenoxylum reitzii (Verbenaceae), a tree endemic to the Brazilian Atlantic Forest(1)

• Premise of the study: Microsatellite markers were developed for Verbenoxylum reitzii (Verbenaceae), a tree endemic to the Brazilian Atlantic Forest, to investigate their usefulness in population genetic studies. The loci were tested for cross-amplification in the related genera Recordia and Durant...

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Autores principales: Thode, Verônica A., Backes, Alice, Mader, Geraldo, Kriedt, Raquel, Bonatto, Sandro L., Freitas, Loreta B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103448/
https://www.ncbi.nlm.nih.gov/pubmed/25202575
http://dx.doi.org/10.3732/apps.1300005
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author Thode, Verônica A.
Backes, Alice
Mader, Geraldo
Kriedt, Raquel
Bonatto, Sandro L.
Freitas, Loreta B.
author_facet Thode, Verônica A.
Backes, Alice
Mader, Geraldo
Kriedt, Raquel
Bonatto, Sandro L.
Freitas, Loreta B.
author_sort Thode, Verônica A.
collection PubMed
description • Premise of the study: Microsatellite markers were developed for Verbenoxylum reitzii (Verbenaceae), a tree endemic to the Brazilian Atlantic Forest, to investigate their usefulness in population genetic studies. The loci were tested for cross-amplification in the related genera Recordia and Duranta. • Methods and Results: Eleven polymorphic microsatellite markers were isolated from an enriched library of V. reitzii and characterized. The primers were tested on 60 individuals from three populations of this species. The number of alleles per locus ranged from two to 11, and the observed and expected heterozygosities varied from 0.0 to 1.0 and from 0.088 to 0.758, respectively. Ten loci successfully amplified in R. boliviana and all failed in D. vestita. • Conclusions: Our results suggest the usefulness of the microsatellite loci developed here to access genetic variability for phylogeographic and population genetic studies in V. reitzii, which are important for the conservation of this rare species.
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spelling pubmed-41034482014-09-08 Development of microsatellites for Verbenoxylum reitzii (Verbenaceae), a tree endemic to the Brazilian Atlantic Forest(1) Thode, Verônica A. Backes, Alice Mader, Geraldo Kriedt, Raquel Bonatto, Sandro L. Freitas, Loreta B. Appl Plant Sci Primer Note • Premise of the study: Microsatellite markers were developed for Verbenoxylum reitzii (Verbenaceae), a tree endemic to the Brazilian Atlantic Forest, to investigate their usefulness in population genetic studies. The loci were tested for cross-amplification in the related genera Recordia and Duranta. • Methods and Results: Eleven polymorphic microsatellite markers were isolated from an enriched library of V. reitzii and characterized. The primers were tested on 60 individuals from three populations of this species. The number of alleles per locus ranged from two to 11, and the observed and expected heterozygosities varied from 0.0 to 1.0 and from 0.088 to 0.758, respectively. Ten loci successfully amplified in R. boliviana and all failed in D. vestita. • Conclusions: Our results suggest the usefulness of the microsatellite loci developed here to access genetic variability for phylogeographic and population genetic studies in V. reitzii, which are important for the conservation of this rare species. Botanical Society of America 2013-07-15 /pmc/articles/PMC4103448/ /pubmed/25202575 http://dx.doi.org/10.3732/apps.1300005 Text en © 2013 Thode et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA).
spellingShingle Primer Note
Thode, Verônica A.
Backes, Alice
Mader, Geraldo
Kriedt, Raquel
Bonatto, Sandro L.
Freitas, Loreta B.
Development of microsatellites for Verbenoxylum reitzii (Verbenaceae), a tree endemic to the Brazilian Atlantic Forest(1)
title Development of microsatellites for Verbenoxylum reitzii (Verbenaceae), a tree endemic to the Brazilian Atlantic Forest(1)
title_full Development of microsatellites for Verbenoxylum reitzii (Verbenaceae), a tree endemic to the Brazilian Atlantic Forest(1)
title_fullStr Development of microsatellites for Verbenoxylum reitzii (Verbenaceae), a tree endemic to the Brazilian Atlantic Forest(1)
title_full_unstemmed Development of microsatellites for Verbenoxylum reitzii (Verbenaceae), a tree endemic to the Brazilian Atlantic Forest(1)
title_short Development of microsatellites for Verbenoxylum reitzii (Verbenaceae), a tree endemic to the Brazilian Atlantic Forest(1)
title_sort development of microsatellites for verbenoxylum reitzii (verbenaceae), a tree endemic to the brazilian atlantic forest(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103448/
https://www.ncbi.nlm.nih.gov/pubmed/25202575
http://dx.doi.org/10.3732/apps.1300005
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