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Characterization of microsatellite markers for the vulnerable grassland forb Senecio macrocarpus (Asteraceae)(1)
• Premise of the study: Development of microsatellite markers for the vulnerable forb Senecio macrocarpus was performed to begin an assessment of its population structure and breeding method to aid in the conservation of the species in Victoria, Australia. • Methods and Results: Fifteen microsatelli...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103458/ https://www.ncbi.nlm.nih.gov/pubmed/25202496 http://dx.doi.org/10.3732/apps.1300041 |
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author | Ahrens, Collin W. James, Elizabeth A. |
author_facet | Ahrens, Collin W. James, Elizabeth A. |
author_sort | Ahrens, Collin W. |
collection | PubMed |
description | • Premise of the study: Development of microsatellite markers for the vulnerable forb Senecio macrocarpus was performed to begin an assessment of its population structure and breeding method to aid in the conservation of the species in Victoria, Australia. • Methods and Results: Fifteen microsatellite markers were developed for S. macrocarpus from 454 pyrosequencing. The markers were tested on 104 individuals from four populations. The markers produced between two and seven alleles per locus while the expected heterozygosity ranged from 0.20 to 0.67 and the observed heterozygosity ranged from 0.00 to 1.00. The observed heterozygosity is suggestive that the populations may be apomictic. • Conclusions: The microsatellite markers developed for S. macrocarpus are intended to be used on future studies that aim to assess the population genetics and local breeding dynamics of the species with an emphasis on conservation. |
format | Online Article Text |
id | pubmed-4103458 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-41034582014-09-08 Characterization of microsatellite markers for the vulnerable grassland forb Senecio macrocarpus (Asteraceae)(1) Ahrens, Collin W. James, Elizabeth A. Appl Plant Sci Primer Note • Premise of the study: Development of microsatellite markers for the vulnerable forb Senecio macrocarpus was performed to begin an assessment of its population structure and breeding method to aid in the conservation of the species in Victoria, Australia. • Methods and Results: Fifteen microsatellite markers were developed for S. macrocarpus from 454 pyrosequencing. The markers were tested on 104 individuals from four populations. The markers produced between two and seven alleles per locus while the expected heterozygosity ranged from 0.20 to 0.67 and the observed heterozygosity ranged from 0.00 to 1.00. The observed heterozygosity is suggestive that the populations may be apomictic. • Conclusions: The microsatellite markers developed for S. macrocarpus are intended to be used on future studies that aim to assess the population genetics and local breeding dynamics of the species with an emphasis on conservation. Botanical Society of America 2013-10-28 /pmc/articles/PMC4103458/ /pubmed/25202496 http://dx.doi.org/10.3732/apps.1300041 Text en © 2013 Ahrens and James. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA). |
spellingShingle | Primer Note Ahrens, Collin W. James, Elizabeth A. Characterization of microsatellite markers for the vulnerable grassland forb Senecio macrocarpus (Asteraceae)(1) |
title | Characterization of microsatellite markers for the vulnerable grassland forb Senecio macrocarpus (Asteraceae)(1) |
title_full | Characterization of microsatellite markers for the vulnerable grassland forb Senecio macrocarpus (Asteraceae)(1) |
title_fullStr | Characterization of microsatellite markers for the vulnerable grassland forb Senecio macrocarpus (Asteraceae)(1) |
title_full_unstemmed | Characterization of microsatellite markers for the vulnerable grassland forb Senecio macrocarpus (Asteraceae)(1) |
title_short | Characterization of microsatellite markers for the vulnerable grassland forb Senecio macrocarpus (Asteraceae)(1) |
title_sort | characterization of microsatellite markers for the vulnerable grassland forb senecio macrocarpus (asteraceae)(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103458/ https://www.ncbi.nlm.nih.gov/pubmed/25202496 http://dx.doi.org/10.3732/apps.1300041 |
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