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Microsatellite primers in the weedy annual herb Anacyclus clavatus (Asteraceae) and four closely related species(1)
• Premise of the study: Nuclear microsatellite primers were developed for the weedy herb Anacyclus clavatus to study the genetic structure of hybrid zones with closely related taxa in the western Mediterranean Basin, where different floral phenotypes are present. • Methods and Results: We obtained t...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103460/ https://www.ncbi.nlm.nih.gov/pubmed/25202498 http://dx.doi.org/10.3732/apps.1300043 |
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author | Agudo, Alicia Picó, F. Xavier Álvarez, Inés |
author_facet | Agudo, Alicia Picó, F. Xavier Álvarez, Inés |
author_sort | Agudo, Alicia |
collection | PubMed |
description | • Premise of the study: Nuclear microsatellite primers were developed for the weedy herb Anacyclus clavatus to study the genetic structure of hybrid zones with closely related taxa in the western Mediterranean Basin, where different floral phenotypes are present. • Methods and Results: We obtained two microsatellite libraries using next-generation sequencing and Sanger sequencing of cloned restriction fragments. A total of 13 polymorphic and 11 monomorphic loci were identified in three Iberian populations of A. clavatus. The primers amplified di- and trinucleotide repeats with 1–8 alleles per locus. Most primers also amplified in A. homogamos, A. monanthos, A. radiatus, and A. valentinus. • Conclusions: These results indicate the utility of these markers in A. clavatus for population genetic and hybridization studies as well as their applicability across the genus. |
format | Online Article Text |
id | pubmed-4103460 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-41034602014-09-08 Microsatellite primers in the weedy annual herb Anacyclus clavatus (Asteraceae) and four closely related species(1) Agudo, Alicia Picó, F. Xavier Álvarez, Inés Appl Plant Sci Primer Note • Premise of the study: Nuclear microsatellite primers were developed for the weedy herb Anacyclus clavatus to study the genetic structure of hybrid zones with closely related taxa in the western Mediterranean Basin, where different floral phenotypes are present. • Methods and Results: We obtained two microsatellite libraries using next-generation sequencing and Sanger sequencing of cloned restriction fragments. A total of 13 polymorphic and 11 monomorphic loci were identified in three Iberian populations of A. clavatus. The primers amplified di- and trinucleotide repeats with 1–8 alleles per locus. Most primers also amplified in A. homogamos, A. monanthos, A. radiatus, and A. valentinus. • Conclusions: These results indicate the utility of these markers in A. clavatus for population genetic and hybridization studies as well as their applicability across the genus. Botanical Society of America 2013-10-31 /pmc/articles/PMC4103460/ /pubmed/25202498 http://dx.doi.org/10.3732/apps.1300043 Text en © 2013 Agudo et al. Botanical Society of America, Inc. http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA). |
spellingShingle | Primer Note Agudo, Alicia Picó, F. Xavier Álvarez, Inés Microsatellite primers in the weedy annual herb Anacyclus clavatus (Asteraceae) and four closely related species(1) |
title | Microsatellite primers in the weedy annual herb Anacyclus clavatus (Asteraceae) and four closely related species(1) |
title_full | Microsatellite primers in the weedy annual herb Anacyclus clavatus (Asteraceae) and four closely related species(1) |
title_fullStr | Microsatellite primers in the weedy annual herb Anacyclus clavatus (Asteraceae) and four closely related species(1) |
title_full_unstemmed | Microsatellite primers in the weedy annual herb Anacyclus clavatus (Asteraceae) and four closely related species(1) |
title_short | Microsatellite primers in the weedy annual herb Anacyclus clavatus (Asteraceae) and four closely related species(1) |
title_sort | microsatellite primers in the weedy annual herb anacyclus clavatus (asteraceae) and four closely related species(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103460/ https://www.ncbi.nlm.nih.gov/pubmed/25202498 http://dx.doi.org/10.3732/apps.1300043 |
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