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Microsatellite primers in the weedy annual herb Anacyclus clavatus (Asteraceae) and four closely related species(1)

• Premise of the study: Nuclear microsatellite primers were developed for the weedy herb Anacyclus clavatus to study the genetic structure of hybrid zones with closely related taxa in the western Mediterranean Basin, where different floral phenotypes are present. • Methods and Results: We obtained t...

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Detalles Bibliográficos
Autores principales: Agudo, Alicia, Picó, F. Xavier, Álvarez, Inés
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103460/
https://www.ncbi.nlm.nih.gov/pubmed/25202498
http://dx.doi.org/10.3732/apps.1300043
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author Agudo, Alicia
Picó, F. Xavier
Álvarez, Inés
author_facet Agudo, Alicia
Picó, F. Xavier
Álvarez, Inés
author_sort Agudo, Alicia
collection PubMed
description • Premise of the study: Nuclear microsatellite primers were developed for the weedy herb Anacyclus clavatus to study the genetic structure of hybrid zones with closely related taxa in the western Mediterranean Basin, where different floral phenotypes are present. • Methods and Results: We obtained two microsatellite libraries using next-generation sequencing and Sanger sequencing of cloned restriction fragments. A total of 13 polymorphic and 11 monomorphic loci were identified in three Iberian populations of A. clavatus. The primers amplified di- and trinucleotide repeats with 1–8 alleles per locus. Most primers also amplified in A. homogamos, A. monanthos, A. radiatus, and A. valentinus. • Conclusions: These results indicate the utility of these markers in A. clavatus for population genetic and hybridization studies as well as their applicability across the genus.
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spelling pubmed-41034602014-09-08 Microsatellite primers in the weedy annual herb Anacyclus clavatus (Asteraceae) and four closely related species(1) Agudo, Alicia Picó, F. Xavier Álvarez, Inés Appl Plant Sci Primer Note • Premise of the study: Nuclear microsatellite primers were developed for the weedy herb Anacyclus clavatus to study the genetic structure of hybrid zones with closely related taxa in the western Mediterranean Basin, where different floral phenotypes are present. • Methods and Results: We obtained two microsatellite libraries using next-generation sequencing and Sanger sequencing of cloned restriction fragments. A total of 13 polymorphic and 11 monomorphic loci were identified in three Iberian populations of A. clavatus. The primers amplified di- and trinucleotide repeats with 1–8 alleles per locus. Most primers also amplified in A. homogamos, A. monanthos, A. radiatus, and A. valentinus. • Conclusions: These results indicate the utility of these markers in A. clavatus for population genetic and hybridization studies as well as their applicability across the genus. Botanical Society of America 2013-10-31 /pmc/articles/PMC4103460/ /pubmed/25202498 http://dx.doi.org/10.3732/apps.1300043 Text en © 2013 Agudo et al. Botanical Society of America, Inc. http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA).
spellingShingle Primer Note
Agudo, Alicia
Picó, F. Xavier
Álvarez, Inés
Microsatellite primers in the weedy annual herb Anacyclus clavatus (Asteraceae) and four closely related species(1)
title Microsatellite primers in the weedy annual herb Anacyclus clavatus (Asteraceae) and four closely related species(1)
title_full Microsatellite primers in the weedy annual herb Anacyclus clavatus (Asteraceae) and four closely related species(1)
title_fullStr Microsatellite primers in the weedy annual herb Anacyclus clavatus (Asteraceae) and four closely related species(1)
title_full_unstemmed Microsatellite primers in the weedy annual herb Anacyclus clavatus (Asteraceae) and four closely related species(1)
title_short Microsatellite primers in the weedy annual herb Anacyclus clavatus (Asteraceae) and four closely related species(1)
title_sort microsatellite primers in the weedy annual herb anacyclus clavatus (asteraceae) and four closely related species(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103460/
https://www.ncbi.nlm.nih.gov/pubmed/25202498
http://dx.doi.org/10.3732/apps.1300043
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