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Characterization of 10 microsatellite loci for Bathysa australis (Rubiaceae)(1)
• Premise of the study: Bathysa australis is a common subcanopy tree from the Atlantic Forest that is pollinated by bees and wasps and produces autochoric seeds. This species exhibits great phenotypic plasticity along the elevational gradient of Serra do Mar in southeastern Brazil. We expect to asse...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103462/ https://www.ncbi.nlm.nih.gov/pubmed/25202500 http://dx.doi.org/10.3732/apps.1300055 |
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author | Reis, Talita S. Ciampi-Guillardi, Maísa Baldauf, Cristina Souza, Anete P. dos Santos, Flavio A. M. |
author_facet | Reis, Talita S. Ciampi-Guillardi, Maísa Baldauf, Cristina Souza, Anete P. dos Santos, Flavio A. M. |
author_sort | Reis, Talita S. |
collection | PubMed |
description | • Premise of the study: Bathysa australis is a common subcanopy tree from the Atlantic Forest that is pollinated by bees and wasps and produces autochoric seeds. This species exhibits great phenotypic plasticity along the elevational gradient of Serra do Mar in southeastern Brazil. We expect to assess the genetic diversity and gene flow between populations of this species along the elevational gradient. • Methods and Results: We developed a microsatellite-enriched genomic library for B. australis, and 10 microsatellite loci were successfully amplified, ranging from one to 13 alleles per locus. The observed and expected heterozygosities ranged from 0.333 to 0.900 (average: 0.629) and 0.564 to 0.900 (average: 0.742), respectively. • Conclusions: These are the first microsatellite markers developed for the genus Bathysa and may be useful in other species of the Condamineeae tribe. These primers will be an important tool for studies of population ecology and conservation genetics. |
format | Online Article Text |
id | pubmed-4103462 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-41034622014-09-08 Characterization of 10 microsatellite loci for Bathysa australis (Rubiaceae)(1) Reis, Talita S. Ciampi-Guillardi, Maísa Baldauf, Cristina Souza, Anete P. dos Santos, Flavio A. M. Appl Plant Sci Primer Note • Premise of the study: Bathysa australis is a common subcanopy tree from the Atlantic Forest that is pollinated by bees and wasps and produces autochoric seeds. This species exhibits great phenotypic plasticity along the elevational gradient of Serra do Mar in southeastern Brazil. We expect to assess the genetic diversity and gene flow between populations of this species along the elevational gradient. • Methods and Results: We developed a microsatellite-enriched genomic library for B. australis, and 10 microsatellite loci were successfully amplified, ranging from one to 13 alleles per locus. The observed and expected heterozygosities ranged from 0.333 to 0.900 (average: 0.629) and 0.564 to 0.900 (average: 0.742), respectively. • Conclusions: These are the first microsatellite markers developed for the genus Bathysa and may be useful in other species of the Condamineeae tribe. These primers will be an important tool for studies of population ecology and conservation genetics. Botanical Society of America 2013-10-31 /pmc/articles/PMC4103462/ /pubmed/25202500 http://dx.doi.org/10.3732/apps.1300055 Text en © 2013 Reis et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA). |
spellingShingle | Primer Note Reis, Talita S. Ciampi-Guillardi, Maísa Baldauf, Cristina Souza, Anete P. dos Santos, Flavio A. M. Characterization of 10 microsatellite loci for Bathysa australis (Rubiaceae)(1) |
title | Characterization of 10 microsatellite loci for Bathysa australis (Rubiaceae)(1) |
title_full | Characterization of 10 microsatellite loci for Bathysa australis (Rubiaceae)(1) |
title_fullStr | Characterization of 10 microsatellite loci for Bathysa australis (Rubiaceae)(1) |
title_full_unstemmed | Characterization of 10 microsatellite loci for Bathysa australis (Rubiaceae)(1) |
title_short | Characterization of 10 microsatellite loci for Bathysa australis (Rubiaceae)(1) |
title_sort | characterization of 10 microsatellite loci for bathysa australis (rubiaceae)(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103462/ https://www.ncbi.nlm.nih.gov/pubmed/25202500 http://dx.doi.org/10.3732/apps.1300055 |
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