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Development of microsatellite markers for two Australian Persoonia (Proteaceae) species using two different techniques(1)

• Premise of the study: Microsatellite markers were developed and cross-species transferability assessed for two Persoonia species to evaluate genetic diversity and population genetic structure of these broadly distributed southwest Australian tree species. • Methods and Results: Microsatellite-enri...

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Autores principales: Stingemore, Jessica A., Nevill, Paul G., Gardner, Michael G., Krauss, Siegfried L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103465/
https://www.ncbi.nlm.nih.gov/pubmed/25202485
http://dx.doi.org/10.3732/apps.1300023
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author Stingemore, Jessica A.
Nevill, Paul G.
Gardner, Michael G.
Krauss, Siegfried L.
author_facet Stingemore, Jessica A.
Nevill, Paul G.
Gardner, Michael G.
Krauss, Siegfried L.
author_sort Stingemore, Jessica A.
collection PubMed
description • Premise of the study: Microsatellite markers were developed and cross-species transferability assessed for two Persoonia species to evaluate genetic diversity and population genetic structure of these broadly distributed southwest Australian tree species. • Methods and Results: Microsatellite-enriched libraries and 454 GS-FLX shotgun sequencing were used to identity nine microsatellite loci for P. elliptica (one 454; eight cloning) and six for P. longifolia (three 454; three cloning). These loci were screened for variation in individuals from populations in southwestern Australia. In P. elliptica, observed and expected heterozygosities ranged from 0.46 to 0.93 and 0.42 to 0.88, respectively. For P. longifolia, observed and expected heterozygosities ranged from 0.04 to 0.88 and 0.04 to 0.84, respectively. • Conclusions: The microsatellites identified in this study will enable the examination of population and spatial structuring of genetic diversity in P. elliptica and P. longifolia, two priority species for mine site restoration in southwestern Australia.
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spelling pubmed-41034652014-09-08 Development of microsatellite markers for two Australian Persoonia (Proteaceae) species using two different techniques(1) Stingemore, Jessica A. Nevill, Paul G. Gardner, Michael G. Krauss, Siegfried L. Appl Plant Sci Primer Note • Premise of the study: Microsatellite markers were developed and cross-species transferability assessed for two Persoonia species to evaluate genetic diversity and population genetic structure of these broadly distributed southwest Australian tree species. • Methods and Results: Microsatellite-enriched libraries and 454 GS-FLX shotgun sequencing were used to identity nine microsatellite loci for P. elliptica (one 454; eight cloning) and six for P. longifolia (three 454; three cloning). These loci were screened for variation in individuals from populations in southwestern Australia. In P. elliptica, observed and expected heterozygosities ranged from 0.46 to 0.93 and 0.42 to 0.88, respectively. For P. longifolia, observed and expected heterozygosities ranged from 0.04 to 0.88 and 0.04 to 0.84, respectively. • Conclusions: The microsatellites identified in this study will enable the examination of population and spatial structuring of genetic diversity in P. elliptica and P. longifolia, two priority species for mine site restoration in southwestern Australia. Botanical Society of America 2013-10-01 /pmc/articles/PMC4103465/ /pubmed/25202485 http://dx.doi.org/10.3732/apps.1300023 Text en © 2013 Stingemore et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA).
spellingShingle Primer Note
Stingemore, Jessica A.
Nevill, Paul G.
Gardner, Michael G.
Krauss, Siegfried L.
Development of microsatellite markers for two Australian Persoonia (Proteaceae) species using two different techniques(1)
title Development of microsatellite markers for two Australian Persoonia (Proteaceae) species using two different techniques(1)
title_full Development of microsatellite markers for two Australian Persoonia (Proteaceae) species using two different techniques(1)
title_fullStr Development of microsatellite markers for two Australian Persoonia (Proteaceae) species using two different techniques(1)
title_full_unstemmed Development of microsatellite markers for two Australian Persoonia (Proteaceae) species using two different techniques(1)
title_short Development of microsatellite markers for two Australian Persoonia (Proteaceae) species using two different techniques(1)
title_sort development of microsatellite markers for two australian persoonia (proteaceae) species using two different techniques(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103465/
https://www.ncbi.nlm.nih.gov/pubmed/25202485
http://dx.doi.org/10.3732/apps.1300023
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