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Development of microsatellite markers for two Australian Persoonia (Proteaceae) species using two different techniques(1)
• Premise of the study: Microsatellite markers were developed and cross-species transferability assessed for two Persoonia species to evaluate genetic diversity and population genetic structure of these broadly distributed southwest Australian tree species. • Methods and Results: Microsatellite-enri...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103465/ https://www.ncbi.nlm.nih.gov/pubmed/25202485 http://dx.doi.org/10.3732/apps.1300023 |
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author | Stingemore, Jessica A. Nevill, Paul G. Gardner, Michael G. Krauss, Siegfried L. |
author_facet | Stingemore, Jessica A. Nevill, Paul G. Gardner, Michael G. Krauss, Siegfried L. |
author_sort | Stingemore, Jessica A. |
collection | PubMed |
description | • Premise of the study: Microsatellite markers were developed and cross-species transferability assessed for two Persoonia species to evaluate genetic diversity and population genetic structure of these broadly distributed southwest Australian tree species. • Methods and Results: Microsatellite-enriched libraries and 454 GS-FLX shotgun sequencing were used to identity nine microsatellite loci for P. elliptica (one 454; eight cloning) and six for P. longifolia (three 454; three cloning). These loci were screened for variation in individuals from populations in southwestern Australia. In P. elliptica, observed and expected heterozygosities ranged from 0.46 to 0.93 and 0.42 to 0.88, respectively. For P. longifolia, observed and expected heterozygosities ranged from 0.04 to 0.88 and 0.04 to 0.84, respectively. • Conclusions: The microsatellites identified in this study will enable the examination of population and spatial structuring of genetic diversity in P. elliptica and P. longifolia, two priority species for mine site restoration in southwestern Australia. |
format | Online Article Text |
id | pubmed-4103465 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-41034652014-09-08 Development of microsatellite markers for two Australian Persoonia (Proteaceae) species using two different techniques(1) Stingemore, Jessica A. Nevill, Paul G. Gardner, Michael G. Krauss, Siegfried L. Appl Plant Sci Primer Note • Premise of the study: Microsatellite markers were developed and cross-species transferability assessed for two Persoonia species to evaluate genetic diversity and population genetic structure of these broadly distributed southwest Australian tree species. • Methods and Results: Microsatellite-enriched libraries and 454 GS-FLX shotgun sequencing were used to identity nine microsatellite loci for P. elliptica (one 454; eight cloning) and six for P. longifolia (three 454; three cloning). These loci were screened for variation in individuals from populations in southwestern Australia. In P. elliptica, observed and expected heterozygosities ranged from 0.46 to 0.93 and 0.42 to 0.88, respectively. For P. longifolia, observed and expected heterozygosities ranged from 0.04 to 0.88 and 0.04 to 0.84, respectively. • Conclusions: The microsatellites identified in this study will enable the examination of population and spatial structuring of genetic diversity in P. elliptica and P. longifolia, two priority species for mine site restoration in southwestern Australia. Botanical Society of America 2013-10-01 /pmc/articles/PMC4103465/ /pubmed/25202485 http://dx.doi.org/10.3732/apps.1300023 Text en © 2013 Stingemore et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA). |
spellingShingle | Primer Note Stingemore, Jessica A. Nevill, Paul G. Gardner, Michael G. Krauss, Siegfried L. Development of microsatellite markers for two Australian Persoonia (Proteaceae) species using two different techniques(1) |
title | Development of microsatellite markers for two Australian Persoonia (Proteaceae) species using two different techniques(1) |
title_full | Development of microsatellite markers for two Australian Persoonia (Proteaceae) species using two different techniques(1) |
title_fullStr | Development of microsatellite markers for two Australian Persoonia (Proteaceae) species using two different techniques(1) |
title_full_unstemmed | Development of microsatellite markers for two Australian Persoonia (Proteaceae) species using two different techniques(1) |
title_short | Development of microsatellite markers for two Australian Persoonia (Proteaceae) species using two different techniques(1) |
title_sort | development of microsatellite markers for two australian persoonia (proteaceae) species using two different techniques(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103465/ https://www.ncbi.nlm.nih.gov/pubmed/25202485 http://dx.doi.org/10.3732/apps.1300023 |
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