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BioJS: an open source standard for biological visualisation – its status in 2014
BioJS is a community-based standard and repository of functional components to represent biological information on the web. The development of BioJS has been prompted by the growing need for bioinformatics visualisation tools to be easily shared, reused and discovered. Its modular architecture makes...
| Autores principales: | , , , , , , , , , , , , , , , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
F1000Research
2014
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| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103492/ https://www.ncbi.nlm.nih.gov/pubmed/25075290 http://dx.doi.org/10.12688/f1000research.3-55.v1 |
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| author | Corpas, Manuel Jimenez, Rafael Carbon, Seth J García, Alex Garcia, Leyla Goldberg, Tatyana Gomez, John Kalderimis, Alexis Lewis, Suzanna E Mulvany, Ian Pawlik, Aleksandra Rowland, Francis Salazar, Gustavo Schreiber, Fabian Sillitoe, Ian Spooner, William H Thanki, Anil S. Villaveces, José M Yachdav, Guy Hermjakob, Henning |
| author_facet | Corpas, Manuel Jimenez, Rafael Carbon, Seth J García, Alex Garcia, Leyla Goldberg, Tatyana Gomez, John Kalderimis, Alexis Lewis, Suzanna E Mulvany, Ian Pawlik, Aleksandra Rowland, Francis Salazar, Gustavo Schreiber, Fabian Sillitoe, Ian Spooner, William H Thanki, Anil S. Villaveces, José M Yachdav, Guy Hermjakob, Henning |
| author_sort | Corpas, Manuel |
| collection | PubMed |
| description | BioJS is a community-based standard and repository of functional components to represent biological information on the web. The development of BioJS has been prompted by the growing need for bioinformatics visualisation tools to be easily shared, reused and discovered. Its modular architecture makes it easy for users to find a specific functionality without needing to know how it has been built, while components can be extended or created for implementing new functionality. The BioJS community of developers currently provides a range of functionality that is open access and freely available. A registry has been set up that categorises and provides installation instructions and testing facilities at http://www.ebi.ac.uk/tools/biojs/. The source code for all components is available for ready use at https://github.com/biojs/biojs. |
| format | Online Article Text |
| id | pubmed-4103492 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2014 |
| publisher | F1000Research |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-41034922014-07-28 BioJS: an open source standard for biological visualisation – its status in 2014 Corpas, Manuel Jimenez, Rafael Carbon, Seth J García, Alex Garcia, Leyla Goldberg, Tatyana Gomez, John Kalderimis, Alexis Lewis, Suzanna E Mulvany, Ian Pawlik, Aleksandra Rowland, Francis Salazar, Gustavo Schreiber, Fabian Sillitoe, Ian Spooner, William H Thanki, Anil S. Villaveces, José M Yachdav, Guy Hermjakob, Henning F1000Res Commentary BioJS is a community-based standard and repository of functional components to represent biological information on the web. The development of BioJS has been prompted by the growing need for bioinformatics visualisation tools to be easily shared, reused and discovered. Its modular architecture makes it easy for users to find a specific functionality without needing to know how it has been built, while components can be extended or created for implementing new functionality. The BioJS community of developers currently provides a range of functionality that is open access and freely available. A registry has been set up that categorises and provides installation instructions and testing facilities at http://www.ebi.ac.uk/tools/biojs/. The source code for all components is available for ready use at https://github.com/biojs/biojs. F1000Research 2014-02-13 /pmc/articles/PMC4103492/ /pubmed/25075290 http://dx.doi.org/10.12688/f1000research.3-55.v1 Text en Copyright: © 2014 Corpas M et al. http://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. http://creativecommons.org/publicdomain/zero/1.0/ Data associated with the article are available under the terms of the Creative Commons Zero "No rights reserved" data waiver (CC0 1.0 Public domain dedication). |
| spellingShingle | Commentary Corpas, Manuel Jimenez, Rafael Carbon, Seth J García, Alex Garcia, Leyla Goldberg, Tatyana Gomez, John Kalderimis, Alexis Lewis, Suzanna E Mulvany, Ian Pawlik, Aleksandra Rowland, Francis Salazar, Gustavo Schreiber, Fabian Sillitoe, Ian Spooner, William H Thanki, Anil S. Villaveces, José M Yachdav, Guy Hermjakob, Henning BioJS: an open source standard for biological visualisation – its status in 2014 |
| title | BioJS: an open source standard for biological visualisation – its status in 2014 |
| title_full | BioJS: an open source standard for biological visualisation – its status in 2014 |
| title_fullStr | BioJS: an open source standard for biological visualisation – its status in 2014 |
| title_full_unstemmed | BioJS: an open source standard for biological visualisation – its status in 2014 |
| title_short | BioJS: an open source standard for biological visualisation – its status in 2014 |
| title_sort | biojs: an open source standard for biological visualisation – its status in 2014 |
| topic | Commentary |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103492/ https://www.ncbi.nlm.nih.gov/pubmed/25075290 http://dx.doi.org/10.12688/f1000research.3-55.v1 |
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