Cargando…
N(2)O Emission from Degraded Soybean Nodules Depends on Denitrification by Bradyrhizobium japonicum and Other Microbes in the Rhizosphere
A model system developed to produce N(2)O emissions from degrading soybean nodules in the laboratory was used to clarify the mechanism of N(2)O emission from soybean fields. Soybean plants inoculated with nosZ-defective strains of Bradyrhizobium japonicum USDA110 (ΔnosZ, lacking N(2)O reductase) wer...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Japanese Society of Microbial Ecology/The Japanese Society of Soil Microbiology
2012
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103556/ https://www.ncbi.nlm.nih.gov/pubmed/23047151 http://dx.doi.org/10.1264/jsme2.ME12100 |
_version_ | 1782327169100283904 |
---|---|
author | Inaba, Shoko Ikenishi, Fumio Itakura, Manabu Kikuchi, Masakazu Eda, Shima Chiba, Naohiko Katsuyama, Chie Suwa, Yuichi Mitsui, Hisayuki Minamisawa, Kiwamu |
author_facet | Inaba, Shoko Ikenishi, Fumio Itakura, Manabu Kikuchi, Masakazu Eda, Shima Chiba, Naohiko Katsuyama, Chie Suwa, Yuichi Mitsui, Hisayuki Minamisawa, Kiwamu |
author_sort | Inaba, Shoko |
collection | PubMed |
description | A model system developed to produce N(2)O emissions from degrading soybean nodules in the laboratory was used to clarify the mechanism of N(2)O emission from soybean fields. Soybean plants inoculated with nosZ-defective strains of Bradyrhizobium japonicum USDA110 (ΔnosZ, lacking N(2)O reductase) were grown in aseptic jars. After 30 days, shoot decapitation (D, to promote nodule degradation), soil addition (S, to supply soil microbes), or both (DS) were applied. N(2)O was emitted only with DS treatment. Thus, both soil microbes and nodule degradation are required for the emission of N(2)O from the soybean rhizosphere. The N(2)O flux peaked 15 days after DS treatment. Nitrate addition markedly enhanced N(2)O emission. A (15)N tracer experiment indicated that N(2)O was derived from N fixed in the nodules. To evaluate the contribution of bradyrhizobia, N(2)O emission was compared between a nirK mutant (ΔnirKΔnosZ, lacking nitrite reductase) and ΔnosZ. The N(2)O flux from the ΔnirKΔnosZ rhizosphere was significantly lower than that from ΔnosZ, but was still 40% to 60% of that of ΔnosZ, suggesting that N(2)O emission is due to both B. japonicum and other soil microorganisms. Only nosZ-competent B. japonicum (nosZ+ strain) could take up N(2)O. Therefore, during nodule degradation, both B. japonicum and other soil microorganisms release N(2)O from nodule N via their denitrification processes (N(2)O source), whereas nosZ-competent B. japonicum exclusively takes up N(2)O (N(2)O sink). Net N(2)O flux from soybean rhizosphere is likely determined by the balance of N(2)O source and sink. |
format | Online Article Text |
id | pubmed-4103556 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Japanese Society of Microbial Ecology/The Japanese Society of Soil Microbiology |
record_format | MEDLINE/PubMed |
spelling | pubmed-41035562014-07-24 N(2)O Emission from Degraded Soybean Nodules Depends on Denitrification by Bradyrhizobium japonicum and Other Microbes in the Rhizosphere Inaba, Shoko Ikenishi, Fumio Itakura, Manabu Kikuchi, Masakazu Eda, Shima Chiba, Naohiko Katsuyama, Chie Suwa, Yuichi Mitsui, Hisayuki Minamisawa, Kiwamu Microbes Environ Articles A model system developed to produce N(2)O emissions from degrading soybean nodules in the laboratory was used to clarify the mechanism of N(2)O emission from soybean fields. Soybean plants inoculated with nosZ-defective strains of Bradyrhizobium japonicum USDA110 (ΔnosZ, lacking N(2)O reductase) were grown in aseptic jars. After 30 days, shoot decapitation (D, to promote nodule degradation), soil addition (S, to supply soil microbes), or both (DS) were applied. N(2)O was emitted only with DS treatment. Thus, both soil microbes and nodule degradation are required for the emission of N(2)O from the soybean rhizosphere. The N(2)O flux peaked 15 days after DS treatment. Nitrate addition markedly enhanced N(2)O emission. A (15)N tracer experiment indicated that N(2)O was derived from N fixed in the nodules. To evaluate the contribution of bradyrhizobia, N(2)O emission was compared between a nirK mutant (ΔnirKΔnosZ, lacking nitrite reductase) and ΔnosZ. The N(2)O flux from the ΔnirKΔnosZ rhizosphere was significantly lower than that from ΔnosZ, but was still 40% to 60% of that of ΔnosZ, suggesting that N(2)O emission is due to both B. japonicum and other soil microorganisms. Only nosZ-competent B. japonicum (nosZ+ strain) could take up N(2)O. Therefore, during nodule degradation, both B. japonicum and other soil microorganisms release N(2)O from nodule N via their denitrification processes (N(2)O source), whereas nosZ-competent B. japonicum exclusively takes up N(2)O (N(2)O sink). Net N(2)O flux from soybean rhizosphere is likely determined by the balance of N(2)O source and sink. Japanese Society of Microbial Ecology/The Japanese Society of Soil Microbiology 2012-12 2012-10-05 /pmc/articles/PMC4103556/ /pubmed/23047151 http://dx.doi.org/10.1264/jsme2.ME12100 Text en Copyright © 2012 by the Japanese Society of Microbial Ecology / the Japanese Society of Soil Microbiology http://creativecommons.org/licenses/by/3.0 This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Inaba, Shoko Ikenishi, Fumio Itakura, Manabu Kikuchi, Masakazu Eda, Shima Chiba, Naohiko Katsuyama, Chie Suwa, Yuichi Mitsui, Hisayuki Minamisawa, Kiwamu N(2)O Emission from Degraded Soybean Nodules Depends on Denitrification by Bradyrhizobium japonicum and Other Microbes in the Rhizosphere |
title | N(2)O Emission from Degraded Soybean Nodules Depends on Denitrification by Bradyrhizobium japonicum and Other Microbes in the Rhizosphere |
title_full | N(2)O Emission from Degraded Soybean Nodules Depends on Denitrification by Bradyrhizobium japonicum and Other Microbes in the Rhizosphere |
title_fullStr | N(2)O Emission from Degraded Soybean Nodules Depends on Denitrification by Bradyrhizobium japonicum and Other Microbes in the Rhizosphere |
title_full_unstemmed | N(2)O Emission from Degraded Soybean Nodules Depends on Denitrification by Bradyrhizobium japonicum and Other Microbes in the Rhizosphere |
title_short | N(2)O Emission from Degraded Soybean Nodules Depends on Denitrification by Bradyrhizobium japonicum and Other Microbes in the Rhizosphere |
title_sort | n(2)o emission from degraded soybean nodules depends on denitrification by bradyrhizobium japonicum and other microbes in the rhizosphere |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103556/ https://www.ncbi.nlm.nih.gov/pubmed/23047151 http://dx.doi.org/10.1264/jsme2.ME12100 |
work_keys_str_mv | AT inabashoko n2oemissionfromdegradedsoybeannodulesdependsondenitrificationbybradyrhizobiumjaponicumandothermicrobesintherhizosphere AT ikenishifumio n2oemissionfromdegradedsoybeannodulesdependsondenitrificationbybradyrhizobiumjaponicumandothermicrobesintherhizosphere AT itakuramanabu n2oemissionfromdegradedsoybeannodulesdependsondenitrificationbybradyrhizobiumjaponicumandothermicrobesintherhizosphere AT kikuchimasakazu n2oemissionfromdegradedsoybeannodulesdependsondenitrificationbybradyrhizobiumjaponicumandothermicrobesintherhizosphere AT edashima n2oemissionfromdegradedsoybeannodulesdependsondenitrificationbybradyrhizobiumjaponicumandothermicrobesintherhizosphere AT chibanaohiko n2oemissionfromdegradedsoybeannodulesdependsondenitrificationbybradyrhizobiumjaponicumandothermicrobesintherhizosphere AT katsuyamachie n2oemissionfromdegradedsoybeannodulesdependsondenitrificationbybradyrhizobiumjaponicumandothermicrobesintherhizosphere AT suwayuichi n2oemissionfromdegradedsoybeannodulesdependsondenitrificationbybradyrhizobiumjaponicumandothermicrobesintherhizosphere AT mitsuihisayuki n2oemissionfromdegradedsoybeannodulesdependsondenitrificationbybradyrhizobiumjaponicumandothermicrobesintherhizosphere AT minamisawakiwamu n2oemissionfromdegradedsoybeannodulesdependsondenitrificationbybradyrhizobiumjaponicumandothermicrobesintherhizosphere |