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Microsatellite markers for Cariniana legalis (Lecythidaceae) and their transferability to C. estrellensis(1)

• Premise of the study: Microsatellite primers were developed in the neotropical tree species Cariniana legalis (Lecythidaceae) to investigate its genetic diversity, mating system, and gene flow. • Methods and Results: We identified 96 clones containing 82 repeat motifs from a genomic library enrich...

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Autores principales: Tambarussi, Evandro Vagner, Sebbenn, Alexandre Magno, Moreno, Maria Andréia, Ferraz, Elza Martins, Kageyama, Paulo Yoshio, Vencovsky, Roland
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4105027/
https://www.ncbi.nlm.nih.gov/pubmed/25202554
http://dx.doi.org/10.3732/apps.1200493
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author Tambarussi, Evandro Vagner
Sebbenn, Alexandre Magno
Moreno, Maria Andréia
Ferraz, Elza Martins
Kageyama, Paulo Yoshio
Vencovsky, Roland
author_facet Tambarussi, Evandro Vagner
Sebbenn, Alexandre Magno
Moreno, Maria Andréia
Ferraz, Elza Martins
Kageyama, Paulo Yoshio
Vencovsky, Roland
author_sort Tambarussi, Evandro Vagner
collection PubMed
description • Premise of the study: Microsatellite primers were developed in the neotropical tree species Cariniana legalis (Lecythidaceae) to investigate its genetic diversity, mating system, and gene flow. • Methods and Results: We identified 96 clones containing 82 repeat motifs from a genomic library enriched for (CT)(8) and (GT)(8) motifs. Primer pairs were developed for 13 microsatellite loci and validated in 51 C. legalis specimens and 26 C. estrellensis specimens. Eleven loci were polymorphic, revealing a maximum of two to 15 alleles per locus in C. legalis and three to 12 in C. estrellensis. For C. legalis, the observed (H(o)) and expected (H(e)) heterozygosities ranged from 0 to 0.99 and from 0.07 to 0.90, respectively. For C. estrellensis, H(o) and H(e) ranged from 0 to 0.96 and from 0.14 to 0.91, respectively. • Conclusions: The primers identified polymorphic loci that are suitable to study genetic diversity and structure, mating system, and gene flow in C. legalis and the related species C. estrellensis.
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spelling pubmed-41050272014-09-08 Microsatellite markers for Cariniana legalis (Lecythidaceae) and their transferability to C. estrellensis(1) Tambarussi, Evandro Vagner Sebbenn, Alexandre Magno Moreno, Maria Andréia Ferraz, Elza Martins Kageyama, Paulo Yoshio Vencovsky, Roland Appl Plant Sci Primer Note • Premise of the study: Microsatellite primers were developed in the neotropical tree species Cariniana legalis (Lecythidaceae) to investigate its genetic diversity, mating system, and gene flow. • Methods and Results: We identified 96 clones containing 82 repeat motifs from a genomic library enriched for (CT)(8) and (GT)(8) motifs. Primer pairs were developed for 13 microsatellite loci and validated in 51 C. legalis specimens and 26 C. estrellensis specimens. Eleven loci were polymorphic, revealing a maximum of two to 15 alleles per locus in C. legalis and three to 12 in C. estrellensis. For C. legalis, the observed (H(o)) and expected (H(e)) heterozygosities ranged from 0 to 0.99 and from 0.07 to 0.90, respectively. For C. estrellensis, H(o) and H(e) ranged from 0 to 0.96 and from 0.14 to 0.91, respectively. • Conclusions: The primers identified polymorphic loci that are suitable to study genetic diversity and structure, mating system, and gene flow in C. legalis and the related species C. estrellensis. Botanical Society of America 2013-05-07 /pmc/articles/PMC4105027/ /pubmed/25202554 http://dx.doi.org/10.3732/apps.1200493 Text en © 2013 Botanical Society of America
spellingShingle Primer Note
Tambarussi, Evandro Vagner
Sebbenn, Alexandre Magno
Moreno, Maria Andréia
Ferraz, Elza Martins
Kageyama, Paulo Yoshio
Vencovsky, Roland
Microsatellite markers for Cariniana legalis (Lecythidaceae) and their transferability to C. estrellensis(1)
title Microsatellite markers for Cariniana legalis (Lecythidaceae) and their transferability to C. estrellensis(1)
title_full Microsatellite markers for Cariniana legalis (Lecythidaceae) and their transferability to C. estrellensis(1)
title_fullStr Microsatellite markers for Cariniana legalis (Lecythidaceae) and their transferability to C. estrellensis(1)
title_full_unstemmed Microsatellite markers for Cariniana legalis (Lecythidaceae) and their transferability to C. estrellensis(1)
title_short Microsatellite markers for Cariniana legalis (Lecythidaceae) and their transferability to C. estrellensis(1)
title_sort microsatellite markers for cariniana legalis (lecythidaceae) and their transferability to c. estrellensis(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4105027/
https://www.ncbi.nlm.nih.gov/pubmed/25202554
http://dx.doi.org/10.3732/apps.1200493
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