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Development and characterization of microsatellite markers for Central American Begonia sect. Gireoudia (Begoniaceae)(1)

• Premise of the study: Transcriptome sequence data were used to design microsatellite primers for two widespread Central American Begonia species, B. heracleifolia and B. nelumbiifolia, to investigate population structure and hybridization. • Methods and Results: The transcriptome from vegetative m...

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Detalles Bibliográficos
Autores principales: Twyford, Alex D., Ennos, Richard A., Kidner, Catherine A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4105041/
https://www.ncbi.nlm.nih.gov/pubmed/25202548
http://dx.doi.org/10.3732/apps.1200499
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author Twyford, Alex D.
Ennos, Richard A.
Kidner, Catherine A.
author_facet Twyford, Alex D.
Ennos, Richard A.
Kidner, Catherine A.
author_sort Twyford, Alex D.
collection PubMed
description • Premise of the study: Transcriptome sequence data were used to design microsatellite primers for two widespread Central American Begonia species, B. heracleifolia and B. nelumbiifolia, to investigate population structure and hybridization. • Methods and Results: The transcriptome from vegetative meristem tissue from the related B. plebeja was mined for microsatellite loci, and 31 primer pairs amplified in the target species. Fifteen primer pairs were combined in two multiplex PCR reactions, which amplified an average of four alleles per locus. • Conclusions: The markers developed will be a valuable genetic resource for medium-throughput genotyping of Central American species of Begonia sect. Gireoudia. A subset of these markers have perfect sequence matches to Asian B. venusta, and are promising for studies in other Begonia sections.
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spelling pubmed-41050412014-09-08 Development and characterization of microsatellite markers for Central American Begonia sect. Gireoudia (Begoniaceae)(1) Twyford, Alex D. Ennos, Richard A. Kidner, Catherine A. Appl Plant Sci Primer Note • Premise of the study: Transcriptome sequence data were used to design microsatellite primers for two widespread Central American Begonia species, B. heracleifolia and B. nelumbiifolia, to investigate population structure and hybridization. • Methods and Results: The transcriptome from vegetative meristem tissue from the related B. plebeja was mined for microsatellite loci, and 31 primer pairs amplified in the target species. Fifteen primer pairs were combined in two multiplex PCR reactions, which amplified an average of four alleles per locus. • Conclusions: The markers developed will be a valuable genetic resource for medium-throughput genotyping of Central American species of Begonia sect. Gireoudia. A subset of these markers have perfect sequence matches to Asian B. venusta, and are promising for studies in other Begonia sections. Botanical Society of America 2013-04-30 /pmc/articles/PMC4105041/ /pubmed/25202548 http://dx.doi.org/10.3732/apps.1200499 Text en © 2013 Botanical Society of America
spellingShingle Primer Note
Twyford, Alex D.
Ennos, Richard A.
Kidner, Catherine A.
Development and characterization of microsatellite markers for Central American Begonia sect. Gireoudia (Begoniaceae)(1)
title Development and characterization of microsatellite markers for Central American Begonia sect. Gireoudia (Begoniaceae)(1)
title_full Development and characterization of microsatellite markers for Central American Begonia sect. Gireoudia (Begoniaceae)(1)
title_fullStr Development and characterization of microsatellite markers for Central American Begonia sect. Gireoudia (Begoniaceae)(1)
title_full_unstemmed Development and characterization of microsatellite markers for Central American Begonia sect. Gireoudia (Begoniaceae)(1)
title_short Development and characterization of microsatellite markers for Central American Begonia sect. Gireoudia (Begoniaceae)(1)
title_sort development and characterization of microsatellite markers for central american begonia sect. gireoudia (begoniaceae)(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4105041/
https://www.ncbi.nlm.nih.gov/pubmed/25202548
http://dx.doi.org/10.3732/apps.1200499
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