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Development and characterization of microsatellite markers for Central American Begonia sect. Gireoudia (Begoniaceae)(1)
• Premise of the study: Transcriptome sequence data were used to design microsatellite primers for two widespread Central American Begonia species, B. heracleifolia and B. nelumbiifolia, to investigate population structure and hybridization. • Methods and Results: The transcriptome from vegetative m...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4105041/ https://www.ncbi.nlm.nih.gov/pubmed/25202548 http://dx.doi.org/10.3732/apps.1200499 |
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author | Twyford, Alex D. Ennos, Richard A. Kidner, Catherine A. |
author_facet | Twyford, Alex D. Ennos, Richard A. Kidner, Catherine A. |
author_sort | Twyford, Alex D. |
collection | PubMed |
description | • Premise of the study: Transcriptome sequence data were used to design microsatellite primers for two widespread Central American Begonia species, B. heracleifolia and B. nelumbiifolia, to investigate population structure and hybridization. • Methods and Results: The transcriptome from vegetative meristem tissue from the related B. plebeja was mined for microsatellite loci, and 31 primer pairs amplified in the target species. Fifteen primer pairs were combined in two multiplex PCR reactions, which amplified an average of four alleles per locus. • Conclusions: The markers developed will be a valuable genetic resource for medium-throughput genotyping of Central American species of Begonia sect. Gireoudia. A subset of these markers have perfect sequence matches to Asian B. venusta, and are promising for studies in other Begonia sections. |
format | Online Article Text |
id | pubmed-4105041 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-41050412014-09-08 Development and characterization of microsatellite markers for Central American Begonia sect. Gireoudia (Begoniaceae)(1) Twyford, Alex D. Ennos, Richard A. Kidner, Catherine A. Appl Plant Sci Primer Note • Premise of the study: Transcriptome sequence data were used to design microsatellite primers for two widespread Central American Begonia species, B. heracleifolia and B. nelumbiifolia, to investigate population structure and hybridization. • Methods and Results: The transcriptome from vegetative meristem tissue from the related B. plebeja was mined for microsatellite loci, and 31 primer pairs amplified in the target species. Fifteen primer pairs were combined in two multiplex PCR reactions, which amplified an average of four alleles per locus. • Conclusions: The markers developed will be a valuable genetic resource for medium-throughput genotyping of Central American species of Begonia sect. Gireoudia. A subset of these markers have perfect sequence matches to Asian B. venusta, and are promising for studies in other Begonia sections. Botanical Society of America 2013-04-30 /pmc/articles/PMC4105041/ /pubmed/25202548 http://dx.doi.org/10.3732/apps.1200499 Text en © 2013 Botanical Society of America |
spellingShingle | Primer Note Twyford, Alex D. Ennos, Richard A. Kidner, Catherine A. Development and characterization of microsatellite markers for Central American Begonia sect. Gireoudia (Begoniaceae)(1) |
title | Development and characterization of microsatellite markers for Central American Begonia sect. Gireoudia (Begoniaceae)(1) |
title_full | Development and characterization of microsatellite markers for Central American Begonia sect. Gireoudia (Begoniaceae)(1) |
title_fullStr | Development and characterization of microsatellite markers for Central American Begonia sect. Gireoudia (Begoniaceae)(1) |
title_full_unstemmed | Development and characterization of microsatellite markers for Central American Begonia sect. Gireoudia (Begoniaceae)(1) |
title_short | Development and characterization of microsatellite markers for Central American Begonia sect. Gireoudia (Begoniaceae)(1) |
title_sort | development and characterization of microsatellite markers for central american begonia sect. gireoudia (begoniaceae)(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4105041/ https://www.ncbi.nlm.nih.gov/pubmed/25202548 http://dx.doi.org/10.3732/apps.1200499 |
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