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Development and characterization of polymorphic microsatellite loci in Phellodendron amurense (Rutaceae)(1)
• Premise of the study: Microsatellite markers were developed for the rare species Phellodendron amurense to assess the genetic diversity and population structure of this plant. • Methods and Results: In total, 27 microsatellite markers were developed for P. amurense by using an enriched genomic lib...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4105284/ https://www.ncbi.nlm.nih.gov/pubmed/25202527 http://dx.doi.org/10.3732/apps.1200321 |
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author | Yu, Jing-Hua Chen, Chang-Mei Han, Shi-Jie Guo, Xiao-Rui Yuan, Shu-Sheng Wang, Chun-Jing Zu, Yuan-Gang |
author_facet | Yu, Jing-Hua Chen, Chang-Mei Han, Shi-Jie Guo, Xiao-Rui Yuan, Shu-Sheng Wang, Chun-Jing Zu, Yuan-Gang |
author_sort | Yu, Jing-Hua |
collection | PubMed |
description | • Premise of the study: Microsatellite markers were developed for the rare species Phellodendron amurense to assess the genetic diversity and population structure of this plant. • Methods and Results: In total, 27 microsatellite markers were developed for P. amurense by using an enriched genomic library and hybridization; all of these primers successfully amplified DNA fragments in P. amurense. These markers were screened in 74 individuals from four populations in China; 15 loci were found to be polymorphic, with the number of alleles per locus ranging from one to nine. • Conclusions: The microsatellite markers developed here represent a useful tool for studying the population genetic structure of P. amurense and to inform toward the development of effective conservation programs for this species. |
format | Online Article Text |
id | pubmed-4105284 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-41052842014-09-08 Development and characterization of polymorphic microsatellite loci in Phellodendron amurense (Rutaceae)(1) Yu, Jing-Hua Chen, Chang-Mei Han, Shi-Jie Guo, Xiao-Rui Yuan, Shu-Sheng Wang, Chun-Jing Zu, Yuan-Gang Appl Plant Sci Primer Note • Premise of the study: Microsatellite markers were developed for the rare species Phellodendron amurense to assess the genetic diversity and population structure of this plant. • Methods and Results: In total, 27 microsatellite markers were developed for P. amurense by using an enriched genomic library and hybridization; all of these primers successfully amplified DNA fragments in P. amurense. These markers were screened in 74 individuals from four populations in China; 15 loci were found to be polymorphic, with the number of alleles per locus ranging from one to nine. • Conclusions: The microsatellite markers developed here represent a useful tool for studying the population genetic structure of P. amurense and to inform toward the development of effective conservation programs for this species. Botanical Society of America 2013-02-27 /pmc/articles/PMC4105284/ /pubmed/25202527 http://dx.doi.org/10.3732/apps.1200321 Text en © 2013 Botanical Society of America |
spellingShingle | Primer Note Yu, Jing-Hua Chen, Chang-Mei Han, Shi-Jie Guo, Xiao-Rui Yuan, Shu-Sheng Wang, Chun-Jing Zu, Yuan-Gang Development and characterization of polymorphic microsatellite loci in Phellodendron amurense (Rutaceae)(1) |
title | Development and characterization of polymorphic microsatellite loci in Phellodendron amurense (Rutaceae)(1) |
title_full | Development and characterization of polymorphic microsatellite loci in Phellodendron amurense (Rutaceae)(1) |
title_fullStr | Development and characterization of polymorphic microsatellite loci in Phellodendron amurense (Rutaceae)(1) |
title_full_unstemmed | Development and characterization of polymorphic microsatellite loci in Phellodendron amurense (Rutaceae)(1) |
title_short | Development and characterization of polymorphic microsatellite loci in Phellodendron amurense (Rutaceae)(1) |
title_sort | development and characterization of polymorphic microsatellite loci in phellodendron amurense (rutaceae)(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4105284/ https://www.ncbi.nlm.nih.gov/pubmed/25202527 http://dx.doi.org/10.3732/apps.1200321 |
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