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Development and characterization of polymorphic microsatellite loci in Phellodendron amurense (Rutaceae)(1)

• Premise of the study: Microsatellite markers were developed for the rare species Phellodendron amurense to assess the genetic diversity and population structure of this plant. • Methods and Results: In total, 27 microsatellite markers were developed for P. amurense by using an enriched genomic lib...

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Autores principales: Yu, Jing-Hua, Chen, Chang-Mei, Han, Shi-Jie, Guo, Xiao-Rui, Yuan, Shu-Sheng, Wang, Chun-Jing, Zu, Yuan-Gang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4105284/
https://www.ncbi.nlm.nih.gov/pubmed/25202527
http://dx.doi.org/10.3732/apps.1200321
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author Yu, Jing-Hua
Chen, Chang-Mei
Han, Shi-Jie
Guo, Xiao-Rui
Yuan, Shu-Sheng
Wang, Chun-Jing
Zu, Yuan-Gang
author_facet Yu, Jing-Hua
Chen, Chang-Mei
Han, Shi-Jie
Guo, Xiao-Rui
Yuan, Shu-Sheng
Wang, Chun-Jing
Zu, Yuan-Gang
author_sort Yu, Jing-Hua
collection PubMed
description • Premise of the study: Microsatellite markers were developed for the rare species Phellodendron amurense to assess the genetic diversity and population structure of this plant. • Methods and Results: In total, 27 microsatellite markers were developed for P. amurense by using an enriched genomic library and hybridization; all of these primers successfully amplified DNA fragments in P. amurense. These markers were screened in 74 individuals from four populations in China; 15 loci were found to be polymorphic, with the number of alleles per locus ranging from one to nine. • Conclusions: The microsatellite markers developed here represent a useful tool for studying the population genetic structure of P. amurense and to inform toward the development of effective conservation programs for this species.
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spelling pubmed-41052842014-09-08 Development and characterization of polymorphic microsatellite loci in Phellodendron amurense (Rutaceae)(1) Yu, Jing-Hua Chen, Chang-Mei Han, Shi-Jie Guo, Xiao-Rui Yuan, Shu-Sheng Wang, Chun-Jing Zu, Yuan-Gang Appl Plant Sci Primer Note • Premise of the study: Microsatellite markers were developed for the rare species Phellodendron amurense to assess the genetic diversity and population structure of this plant. • Methods and Results: In total, 27 microsatellite markers were developed for P. amurense by using an enriched genomic library and hybridization; all of these primers successfully amplified DNA fragments in P. amurense. These markers were screened in 74 individuals from four populations in China; 15 loci were found to be polymorphic, with the number of alleles per locus ranging from one to nine. • Conclusions: The microsatellite markers developed here represent a useful tool for studying the population genetic structure of P. amurense and to inform toward the development of effective conservation programs for this species. Botanical Society of America 2013-02-27 /pmc/articles/PMC4105284/ /pubmed/25202527 http://dx.doi.org/10.3732/apps.1200321 Text en © 2013 Botanical Society of America
spellingShingle Primer Note
Yu, Jing-Hua
Chen, Chang-Mei
Han, Shi-Jie
Guo, Xiao-Rui
Yuan, Shu-Sheng
Wang, Chun-Jing
Zu, Yuan-Gang
Development and characterization of polymorphic microsatellite loci in Phellodendron amurense (Rutaceae)(1)
title Development and characterization of polymorphic microsatellite loci in Phellodendron amurense (Rutaceae)(1)
title_full Development and characterization of polymorphic microsatellite loci in Phellodendron amurense (Rutaceae)(1)
title_fullStr Development and characterization of polymorphic microsatellite loci in Phellodendron amurense (Rutaceae)(1)
title_full_unstemmed Development and characterization of polymorphic microsatellite loci in Phellodendron amurense (Rutaceae)(1)
title_short Development and characterization of polymorphic microsatellite loci in Phellodendron amurense (Rutaceae)(1)
title_sort development and characterization of polymorphic microsatellite loci in phellodendron amurense (rutaceae)(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4105284/
https://www.ncbi.nlm.nih.gov/pubmed/25202527
http://dx.doi.org/10.3732/apps.1200321
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