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Microsatellite primers in the lichen symbiotic alga Trebouxia decolorans (Trebouxiophyceae)(1)

• Premise of the study: Polymorphic microsatellite markers were developed for the symbiotic green alga Trebouxia decolorans to study fine-scale population structure and clonal diversity. • Methods and Results: Using Illumina pyrosequencing, 20 microsatellite primer sets were developed for T. decolor...

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Detalles Bibliográficos
Autores principales: Dal Grande, Francesco, Beck, Andreas, Singh, Garima, Schmitt, Imke
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4105286/
https://www.ncbi.nlm.nih.gov/pubmed/25202529
http://dx.doi.org/10.3732/apps.1200400
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author Dal Grande, Francesco
Beck, Andreas
Singh, Garima
Schmitt, Imke
author_facet Dal Grande, Francesco
Beck, Andreas
Singh, Garima
Schmitt, Imke
author_sort Dal Grande, Francesco
collection PubMed
description • Premise of the study: Polymorphic microsatellite markers were developed for the symbiotic green alga Trebouxia decolorans to study fine-scale population structure and clonal diversity. • Methods and Results: Using Illumina pyrosequencing, 20 microsatellite primer sets were developed for T. decolorans. The primer sets were tested on 43 individuals sampled from four subpopulations in Germany. The primers amplified di-, tri-, and tetranucleotide repeats with three to 15 alleles per locus, and the unbiased haploid diversity per locus ranged from 0.636 to 0.821. • Conclusions: The identified microsatellite markers will be useful to study the genetic diversity, dispersal, and reproductive mode of this common lichen photobiont.
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spelling pubmed-41052862014-09-08 Microsatellite primers in the lichen symbiotic alga Trebouxia decolorans (Trebouxiophyceae)(1) Dal Grande, Francesco Beck, Andreas Singh, Garima Schmitt, Imke Appl Plant Sci Primer Note • Premise of the study: Polymorphic microsatellite markers were developed for the symbiotic green alga Trebouxia decolorans to study fine-scale population structure and clonal diversity. • Methods and Results: Using Illumina pyrosequencing, 20 microsatellite primer sets were developed for T. decolorans. The primer sets were tested on 43 individuals sampled from four subpopulations in Germany. The primers amplified di-, tri-, and tetranucleotide repeats with three to 15 alleles per locus, and the unbiased haploid diversity per locus ranged from 0.636 to 0.821. • Conclusions: The identified microsatellite markers will be useful to study the genetic diversity, dispersal, and reproductive mode of this common lichen photobiont. Botanical Society of America 2013-02-15 /pmc/articles/PMC4105286/ /pubmed/25202529 http://dx.doi.org/10.3732/apps.1200400 Text en © 2013 Botanical Society of America
spellingShingle Primer Note
Dal Grande, Francesco
Beck, Andreas
Singh, Garima
Schmitt, Imke
Microsatellite primers in the lichen symbiotic alga Trebouxia decolorans (Trebouxiophyceae)(1)
title Microsatellite primers in the lichen symbiotic alga Trebouxia decolorans (Trebouxiophyceae)(1)
title_full Microsatellite primers in the lichen symbiotic alga Trebouxia decolorans (Trebouxiophyceae)(1)
title_fullStr Microsatellite primers in the lichen symbiotic alga Trebouxia decolorans (Trebouxiophyceae)(1)
title_full_unstemmed Microsatellite primers in the lichen symbiotic alga Trebouxia decolorans (Trebouxiophyceae)(1)
title_short Microsatellite primers in the lichen symbiotic alga Trebouxia decolorans (Trebouxiophyceae)(1)
title_sort microsatellite primers in the lichen symbiotic alga trebouxia decolorans (trebouxiophyceae)(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4105286/
https://www.ncbi.nlm.nih.gov/pubmed/25202529
http://dx.doi.org/10.3732/apps.1200400
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