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Isolation and characterization of microsatellite loci in the invasive herb Solidago altissima (Asteraceae)(1)
• Premise of the study: Microsatellite markers were developed in the perennial herb Solidago altissima from populations within its introduced range in Japan to assess its population structure and to facilitate tracking of invasion expansion. • Methods and Results: Using 454 pyrosequencing, 16 micros...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4105288/ https://www.ncbi.nlm.nih.gov/pubmed/25202531 http://dx.doi.org/10.3732/apps.1200313 |
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author | Sakata, Yuzu Kaneko, Shingo Hayano, Azusa Inoue-Murayama, Miho Ohgushi, Takayuki Isagi, Yuji |
author_facet | Sakata, Yuzu Kaneko, Shingo Hayano, Azusa Inoue-Murayama, Miho Ohgushi, Takayuki Isagi, Yuji |
author_sort | Sakata, Yuzu |
collection | PubMed |
description | • Premise of the study: Microsatellite markers were developed in the perennial herb Solidago altissima from populations within its introduced range in Japan to assess its population structure and to facilitate tracking of invasion expansion. • Methods and Results: Using 454 pyrosequencing, 16 microsatellite primer sets were developed for S. altissima. The primer sets were tested on 70 individuals sampled from three populations in Japan. The primers amplified di- and trinucleotide repeats with five to 25 alleles per locus, and the expected heterozygosity ranged from 0.46 to 0.92. • Conclusions: These results indicate the utility of primers in S. altissima for future research on a wide range of applications, including tracking of invasion dynamics and investigating population genetics of the species. |
format | Online Article Text |
id | pubmed-4105288 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-41052882014-09-08 Isolation and characterization of microsatellite loci in the invasive herb Solidago altissima (Asteraceae)(1) Sakata, Yuzu Kaneko, Shingo Hayano, Azusa Inoue-Murayama, Miho Ohgushi, Takayuki Isagi, Yuji Appl Plant Sci Primer Note • Premise of the study: Microsatellite markers were developed in the perennial herb Solidago altissima from populations within its introduced range in Japan to assess its population structure and to facilitate tracking of invasion expansion. • Methods and Results: Using 454 pyrosequencing, 16 microsatellite primer sets were developed for S. altissima. The primer sets were tested on 70 individuals sampled from three populations in Japan. The primers amplified di- and trinucleotide repeats with five to 25 alleles per locus, and the expected heterozygosity ranged from 0.46 to 0.92. • Conclusions: These results indicate the utility of primers in S. altissima for future research on a wide range of applications, including tracking of invasion dynamics and investigating population genetics of the species. Botanical Society of America 2013-03-22 /pmc/articles/PMC4105288/ /pubmed/25202531 http://dx.doi.org/10.3732/apps.1200313 Text en © 2013 Botanical Society of America |
spellingShingle | Primer Note Sakata, Yuzu Kaneko, Shingo Hayano, Azusa Inoue-Murayama, Miho Ohgushi, Takayuki Isagi, Yuji Isolation and characterization of microsatellite loci in the invasive herb Solidago altissima (Asteraceae)(1) |
title | Isolation and characterization of microsatellite loci in the invasive herb Solidago altissima (Asteraceae)(1) |
title_full | Isolation and characterization of microsatellite loci in the invasive herb Solidago altissima (Asteraceae)(1) |
title_fullStr | Isolation and characterization of microsatellite loci in the invasive herb Solidago altissima (Asteraceae)(1) |
title_full_unstemmed | Isolation and characterization of microsatellite loci in the invasive herb Solidago altissima (Asteraceae)(1) |
title_short | Isolation and characterization of microsatellite loci in the invasive herb Solidago altissima (Asteraceae)(1) |
title_sort | isolation and characterization of microsatellite loci in the invasive herb solidago altissima (asteraceae)(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4105288/ https://www.ncbi.nlm.nih.gov/pubmed/25202531 http://dx.doi.org/10.3732/apps.1200313 |
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