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Characterization of microsatellite loci in Tilia platyphyllos (Malvaceae) and cross-amplification in related species(1)

• Premise of the study: Microsatellite markers in the genus Tilia were developed to investigate the genetic variation in T. platyphyllos and its relationship with T. cordata. • Methods and Results: Fifteen microsatellite markers were developed using a microsatellite enrichment protocol. Most loci sh...

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Detalles Bibliográficos
Autores principales: Phuekvilai, Prattana, Wolff, Kirsten
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4105290/
https://www.ncbi.nlm.nih.gov/pubmed/25202533
http://dx.doi.org/10.3732/apps.1200386
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author Phuekvilai, Prattana
Wolff, Kirsten
author_facet Phuekvilai, Prattana
Wolff, Kirsten
author_sort Phuekvilai, Prattana
collection PubMed
description • Premise of the study: Microsatellite markers in the genus Tilia were developed to investigate the genetic variation in T. platyphyllos and its relationship with T. cordata. • Methods and Results: Fifteen microsatellite markers were developed using a microsatellite enrichment protocol. Most loci show a high level of polymorphism in two T. platyphyllos populations from France. The number of alleles ranged from one to 15, with a mean of 8.96. The mean observed and expected heterozygosities were 0.71 and 0.70, respectively. Cross-amplification results indicated that 12 out of 15 loci amplified polymorphic loci in 23 species in the genus. • Conclusions: These markers will be useful tools for investigating the phylogeography and hybridization of Tilia species.
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spelling pubmed-41052902014-09-08 Characterization of microsatellite loci in Tilia platyphyllos (Malvaceae) and cross-amplification in related species(1) Phuekvilai, Prattana Wolff, Kirsten Appl Plant Sci Primer Note • Premise of the study: Microsatellite markers in the genus Tilia were developed to investigate the genetic variation in T. platyphyllos and its relationship with T. cordata. • Methods and Results: Fifteen microsatellite markers were developed using a microsatellite enrichment protocol. Most loci show a high level of polymorphism in two T. platyphyllos populations from France. The number of alleles ranged from one to 15, with a mean of 8.96. The mean observed and expected heterozygosities were 0.71 and 0.70, respectively. Cross-amplification results indicated that 12 out of 15 loci amplified polymorphic loci in 23 species in the genus. • Conclusions: These markers will be useful tools for investigating the phylogeography and hybridization of Tilia species. Botanical Society of America 2013-03-28 /pmc/articles/PMC4105290/ /pubmed/25202533 http://dx.doi.org/10.3732/apps.1200386 Text en © 2013 Botanical Society of America
spellingShingle Primer Note
Phuekvilai, Prattana
Wolff, Kirsten
Characterization of microsatellite loci in Tilia platyphyllos (Malvaceae) and cross-amplification in related species(1)
title Characterization of microsatellite loci in Tilia platyphyllos (Malvaceae) and cross-amplification in related species(1)
title_full Characterization of microsatellite loci in Tilia platyphyllos (Malvaceae) and cross-amplification in related species(1)
title_fullStr Characterization of microsatellite loci in Tilia platyphyllos (Malvaceae) and cross-amplification in related species(1)
title_full_unstemmed Characterization of microsatellite loci in Tilia platyphyllos (Malvaceae) and cross-amplification in related species(1)
title_short Characterization of microsatellite loci in Tilia platyphyllos (Malvaceae) and cross-amplification in related species(1)
title_sort characterization of microsatellite loci in tilia platyphyllos (malvaceae) and cross-amplification in related species(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4105290/
https://www.ncbi.nlm.nih.gov/pubmed/25202533
http://dx.doi.org/10.3732/apps.1200386
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