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Cost-effective microsatellite markers for Banksia integrifolia (Proteaceae)(1)

• Premise of the study: Microsatellite markers were developed to assess the level of genetic variation and population structure in Banksia integrifolia, a widespread species endemic to eastern Australia. • Methods and Results: We used next-generation sequencing approaches to identify and develop 11...

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Autores principales: Fatemi, Mohammad, Houliston, Gary J., Haddadchi, Azadeh, Gross, Caroline L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4105364/
https://www.ncbi.nlm.nih.gov/pubmed/25202510
http://dx.doi.org/10.3732/apps.1200130
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author Fatemi, Mohammad
Houliston, Gary J.
Haddadchi, Azadeh
Gross, Caroline L.
author_facet Fatemi, Mohammad
Houliston, Gary J.
Haddadchi, Azadeh
Gross, Caroline L.
author_sort Fatemi, Mohammad
collection PubMed
description • Premise of the study: Microsatellite markers were developed to assess the level of genetic variation and population structure in Banksia integrifolia, a widespread species endemic to eastern Australia. • Methods and Results: We used next-generation sequencing approaches to identify and develop 11 polymorphic microsatellite markers with perfect tri- and tetranucleotide repeats. We tested these markers with 71 specimens from three populations. Observed and expected heterozygosities ranged from 0.0 to 0.875 and 0.0 to 0.763, respectively. • Conclusions: The developed markers will be valuable for studies of the population structure, mating system, and selection of provenances for restoration projects involving B. integrifolia.
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spelling pubmed-41053642014-09-08 Cost-effective microsatellite markers for Banksia integrifolia (Proteaceae)(1) Fatemi, Mohammad Houliston, Gary J. Haddadchi, Azadeh Gross, Caroline L. Appl Plant Sci Primer Note • Premise of the study: Microsatellite markers were developed to assess the level of genetic variation and population structure in Banksia integrifolia, a widespread species endemic to eastern Australia. • Methods and Results: We used next-generation sequencing approaches to identify and develop 11 polymorphic microsatellite markers with perfect tri- and tetranucleotide repeats. We tested these markers with 71 specimens from three populations. Observed and expected heterozygosities ranged from 0.0 to 0.875 and 0.0 to 0.763, respectively. • Conclusions: The developed markers will be valuable for studies of the population structure, mating system, and selection of provenances for restoration projects involving B. integrifolia. Botanical Society of America 2013-01-31 /pmc/articles/PMC4105364/ /pubmed/25202510 http://dx.doi.org/10.3732/apps.1200130 Text en © 2013 Botanical Society of America
spellingShingle Primer Note
Fatemi, Mohammad
Houliston, Gary J.
Haddadchi, Azadeh
Gross, Caroline L.
Cost-effective microsatellite markers for Banksia integrifolia (Proteaceae)(1)
title Cost-effective microsatellite markers for Banksia integrifolia (Proteaceae)(1)
title_full Cost-effective microsatellite markers for Banksia integrifolia (Proteaceae)(1)
title_fullStr Cost-effective microsatellite markers for Banksia integrifolia (Proteaceae)(1)
title_full_unstemmed Cost-effective microsatellite markers for Banksia integrifolia (Proteaceae)(1)
title_short Cost-effective microsatellite markers for Banksia integrifolia (Proteaceae)(1)
title_sort cost-effective microsatellite markers for banksia integrifolia (proteaceae)(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4105364/
https://www.ncbi.nlm.nih.gov/pubmed/25202510
http://dx.doi.org/10.3732/apps.1200130
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