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Cost-effective microsatellite markers for Banksia integrifolia (Proteaceae)(1)
• Premise of the study: Microsatellite markers were developed to assess the level of genetic variation and population structure in Banksia integrifolia, a widespread species endemic to eastern Australia. • Methods and Results: We used next-generation sequencing approaches to identify and develop 11...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4105364/ https://www.ncbi.nlm.nih.gov/pubmed/25202510 http://dx.doi.org/10.3732/apps.1200130 |
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author | Fatemi, Mohammad Houliston, Gary J. Haddadchi, Azadeh Gross, Caroline L. |
author_facet | Fatemi, Mohammad Houliston, Gary J. Haddadchi, Azadeh Gross, Caroline L. |
author_sort | Fatemi, Mohammad |
collection | PubMed |
description | • Premise of the study: Microsatellite markers were developed to assess the level of genetic variation and population structure in Banksia integrifolia, a widespread species endemic to eastern Australia. • Methods and Results: We used next-generation sequencing approaches to identify and develop 11 polymorphic microsatellite markers with perfect tri- and tetranucleotide repeats. We tested these markers with 71 specimens from three populations. Observed and expected heterozygosities ranged from 0.0 to 0.875 and 0.0 to 0.763, respectively. • Conclusions: The developed markers will be valuable for studies of the population structure, mating system, and selection of provenances for restoration projects involving B. integrifolia. |
format | Online Article Text |
id | pubmed-4105364 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-41053642014-09-08 Cost-effective microsatellite markers for Banksia integrifolia (Proteaceae)(1) Fatemi, Mohammad Houliston, Gary J. Haddadchi, Azadeh Gross, Caroline L. Appl Plant Sci Primer Note • Premise of the study: Microsatellite markers were developed to assess the level of genetic variation and population structure in Banksia integrifolia, a widespread species endemic to eastern Australia. • Methods and Results: We used next-generation sequencing approaches to identify and develop 11 polymorphic microsatellite markers with perfect tri- and tetranucleotide repeats. We tested these markers with 71 specimens from three populations. Observed and expected heterozygosities ranged from 0.0 to 0.875 and 0.0 to 0.763, respectively. • Conclusions: The developed markers will be valuable for studies of the population structure, mating system, and selection of provenances for restoration projects involving B. integrifolia. Botanical Society of America 2013-01-31 /pmc/articles/PMC4105364/ /pubmed/25202510 http://dx.doi.org/10.3732/apps.1200130 Text en © 2013 Botanical Society of America |
spellingShingle | Primer Note Fatemi, Mohammad Houliston, Gary J. Haddadchi, Azadeh Gross, Caroline L. Cost-effective microsatellite markers for Banksia integrifolia (Proteaceae)(1) |
title | Cost-effective microsatellite markers for Banksia integrifolia (Proteaceae)(1) |
title_full | Cost-effective microsatellite markers for Banksia integrifolia (Proteaceae)(1) |
title_fullStr | Cost-effective microsatellite markers for Banksia integrifolia (Proteaceae)(1) |
title_full_unstemmed | Cost-effective microsatellite markers for Banksia integrifolia (Proteaceae)(1) |
title_short | Cost-effective microsatellite markers for Banksia integrifolia (Proteaceae)(1) |
title_sort | cost-effective microsatellite markers for banksia integrifolia (proteaceae)(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4105364/ https://www.ncbi.nlm.nih.gov/pubmed/25202510 http://dx.doi.org/10.3732/apps.1200130 |
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