Cargando…

Nitrosylation Mechanisms of Mycobacterium tuberculosis and Campylobacter jejuni Truncated Hemoglobins N, O, and P

Truncated hemoglobins (trHbs) are widely distributed in bacteria and plants and have been found in some unicellular eukaryotes. Phylogenetic analysis based on protein sequences shows that trHbs branch into three groups, designated N (or I), O (or II), and P (or III). Most trHbs are involved in the O...

Descripción completa

Detalles Bibliográficos
Autores principales: Ascenzi, Paolo, di Masi, Alessandra, Tundo, Grazia R., Pesce, Alessandra, Visca, Paolo, Coletta, Massimo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4106858/
https://www.ncbi.nlm.nih.gov/pubmed/25051055
http://dx.doi.org/10.1371/journal.pone.0102811
_version_ 1782327542142730240
author Ascenzi, Paolo
di Masi, Alessandra
Tundo, Grazia R.
Pesce, Alessandra
Visca, Paolo
Coletta, Massimo
author_facet Ascenzi, Paolo
di Masi, Alessandra
Tundo, Grazia R.
Pesce, Alessandra
Visca, Paolo
Coletta, Massimo
author_sort Ascenzi, Paolo
collection PubMed
description Truncated hemoglobins (trHbs) are widely distributed in bacteria and plants and have been found in some unicellular eukaryotes. Phylogenetic analysis based on protein sequences shows that trHbs branch into three groups, designated N (or I), O (or II), and P (or III). Most trHbs are involved in the O(2)/NO chemistry and/or oxidation/reduction function, permitting the survival of the microorganism in the host. Here, a detailed comparative analysis of kinetics and/or thermodynamics of (i) ferrous Mycobacterium tubertulosis trHbs N and O (Mt-trHbN and Mt-trHbO, respectively), and Campylobacter jejuni trHb (Cj-trHbP) nitrosylation, (ii) nitrite-mediated nitrosylation of ferrous Mt-trHbN, Mt-trHbO, and Cj-trHbP, and (iii) NO-based reductive nitrosylation of ferric Mt-trHbN, Mt-trHbO, and Cj-trHbP is reported. Ferrous and ferric Mt-trHbN and Cj-trHbP display a very high reactivity towards NO; however, the conversion of nitrite to NO is facilitated primarily by ferrous Mt-trHbN. Values of kinetic and/or thermodynamic parameters reflect specific trHb structural features, such as the ligand diffusion pathways to/from the heme, the heme distal pocket structure and polarity, and the ligand stabilization mechanisms. In particular, the high reactivity of Mt-trHbN and Cj-trHbP reflects the great ligand accessibility to the heme center by two protein matrix tunnels and the E7-path, respectively, and the penta-coordination of the heme-Fe atom. In contrast, the heme-Fe atom of Mt-trHbO the ligand accessibility to the heme center of Mt-trHbO needs large conformational readjustments, thus limiting the heme-based reactivity. These results agree with different roles of Mt-trHbN, Mt-trHbO, and Cj-trHbP in vivo.
format Online
Article
Text
id pubmed-4106858
institution National Center for Biotechnology Information
language English
publishDate 2014
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-41068582014-07-23 Nitrosylation Mechanisms of Mycobacterium tuberculosis and Campylobacter jejuni Truncated Hemoglobins N, O, and P Ascenzi, Paolo di Masi, Alessandra Tundo, Grazia R. Pesce, Alessandra Visca, Paolo Coletta, Massimo PLoS One Research Article Truncated hemoglobins (trHbs) are widely distributed in bacteria and plants and have been found in some unicellular eukaryotes. Phylogenetic analysis based on protein sequences shows that trHbs branch into three groups, designated N (or I), O (or II), and P (or III). Most trHbs are involved in the O(2)/NO chemistry and/or oxidation/reduction function, permitting the survival of the microorganism in the host. Here, a detailed comparative analysis of kinetics and/or thermodynamics of (i) ferrous Mycobacterium tubertulosis trHbs N and O (Mt-trHbN and Mt-trHbO, respectively), and Campylobacter jejuni trHb (Cj-trHbP) nitrosylation, (ii) nitrite-mediated nitrosylation of ferrous Mt-trHbN, Mt-trHbO, and Cj-trHbP, and (iii) NO-based reductive nitrosylation of ferric Mt-trHbN, Mt-trHbO, and Cj-trHbP is reported. Ferrous and ferric Mt-trHbN and Cj-trHbP display a very high reactivity towards NO; however, the conversion of nitrite to NO is facilitated primarily by ferrous Mt-trHbN. Values of kinetic and/or thermodynamic parameters reflect specific trHb structural features, such as the ligand diffusion pathways to/from the heme, the heme distal pocket structure and polarity, and the ligand stabilization mechanisms. In particular, the high reactivity of Mt-trHbN and Cj-trHbP reflects the great ligand accessibility to the heme center by two protein matrix tunnels and the E7-path, respectively, and the penta-coordination of the heme-Fe atom. In contrast, the heme-Fe atom of Mt-trHbO the ligand accessibility to the heme center of Mt-trHbO needs large conformational readjustments, thus limiting the heme-based reactivity. These results agree with different roles of Mt-trHbN, Mt-trHbO, and Cj-trHbP in vivo. Public Library of Science 2014-07-22 /pmc/articles/PMC4106858/ /pubmed/25051055 http://dx.doi.org/10.1371/journal.pone.0102811 Text en © 2014 Ascenzi et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Ascenzi, Paolo
di Masi, Alessandra
Tundo, Grazia R.
Pesce, Alessandra
Visca, Paolo
Coletta, Massimo
Nitrosylation Mechanisms of Mycobacterium tuberculosis and Campylobacter jejuni Truncated Hemoglobins N, O, and P
title Nitrosylation Mechanisms of Mycobacterium tuberculosis and Campylobacter jejuni Truncated Hemoglobins N, O, and P
title_full Nitrosylation Mechanisms of Mycobacterium tuberculosis and Campylobacter jejuni Truncated Hemoglobins N, O, and P
title_fullStr Nitrosylation Mechanisms of Mycobacterium tuberculosis and Campylobacter jejuni Truncated Hemoglobins N, O, and P
title_full_unstemmed Nitrosylation Mechanisms of Mycobacterium tuberculosis and Campylobacter jejuni Truncated Hemoglobins N, O, and P
title_short Nitrosylation Mechanisms of Mycobacterium tuberculosis and Campylobacter jejuni Truncated Hemoglobins N, O, and P
title_sort nitrosylation mechanisms of mycobacterium tuberculosis and campylobacter jejuni truncated hemoglobins n, o, and p
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4106858/
https://www.ncbi.nlm.nih.gov/pubmed/25051055
http://dx.doi.org/10.1371/journal.pone.0102811
work_keys_str_mv AT ascenzipaolo nitrosylationmechanismsofmycobacteriumtuberculosisandcampylobacterjejunitruncatedhemoglobinsnoandp
AT dimasialessandra nitrosylationmechanismsofmycobacteriumtuberculosisandcampylobacterjejunitruncatedhemoglobinsnoandp
AT tundograziar nitrosylationmechanismsofmycobacteriumtuberculosisandcampylobacterjejunitruncatedhemoglobinsnoandp
AT pescealessandra nitrosylationmechanismsofmycobacteriumtuberculosisandcampylobacterjejunitruncatedhemoglobinsnoandp
AT viscapaolo nitrosylationmechanismsofmycobacteriumtuberculosisandcampylobacterjejunitruncatedhemoglobinsnoandp
AT colettamassimo nitrosylationmechanismsofmycobacteriumtuberculosisandcampylobacterjejunitruncatedhemoglobinsnoandp