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Validation of a polygenic risk score for dementia in black and white individuals

OBJECTIVE: To determine whether a polygenic risk score for Alzheimer's disease (AD) predicts dementia probability and memory functioning in non-Hispanic black (NHB) and non-Hispanic white (NHW) participants from a sample not used in previous genome-wide association studies. METHODS: Non-Hispani...

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Autores principales: Marden, Jessica R, Walter, Stefan, Tchetgen Tchetgen, Eric J, Kawachi, Ichiro, Glymour, M Maria
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Blackwell Publishing Ltd 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4107377/
https://www.ncbi.nlm.nih.gov/pubmed/25328845
http://dx.doi.org/10.1002/brb3.248
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author Marden, Jessica R
Walter, Stefan
Tchetgen Tchetgen, Eric J
Kawachi, Ichiro
Glymour, M Maria
author_facet Marden, Jessica R
Walter, Stefan
Tchetgen Tchetgen, Eric J
Kawachi, Ichiro
Glymour, M Maria
author_sort Marden, Jessica R
collection PubMed
description OBJECTIVE: To determine whether a polygenic risk score for Alzheimer's disease (AD) predicts dementia probability and memory functioning in non-Hispanic black (NHB) and non-Hispanic white (NHW) participants from a sample not used in previous genome-wide association studies. METHODS: Non-Hispanic white and NHB Health and Retirement Study (HRS) participants provided genetic information and either a composite memory score (n = 10,401) or a dementia probability score (n = 7690). Dementia probability score was estimated for participants' age 65+ from 2006 to 2010, while memory score was available for participants age 50+. We calculated AD genetic risk scores (AD-GRS) based on 10 polymorphisms confirmed to predict AD, weighting alleles by beta coefficients reported in AlzGene meta-analyses. We used pooled logistic regression to estimate the association of the AD-GRS with dementia probability and generalized linear models to estimate its effect on memory score. RESULTS: Each 0.10 unit change in the AD-GRS was associated with larger relative effects on dementia among NHW aged 65+ (OR = 2.22; 95% CI: 1.79, 2.74; P < 0.001) than NHB (OR=1.33; 95% CI: 1.00, 1.77; P = 0.047), although additive effect estimates were similar. Each 0.10 unit change in the AD-GRS was associated with a −0.07 (95% CI: −0.09, −0.05; P < 0.001) SD difference in memory score among NHW aged 50+, but no significant differences among NHB (β = −0.01; 95% CI: −0.04, 0.01; P = 0.546). [Correction added on 29 July 2014, after first online publication: confidence intervalshave been amended.] The estimated effect of the GRS was significantly smaller among NHB than NHW (P < 0.05) for both outcomes. CONCLUSION: This analysis provides evidence for differential relative effects of the GRS on dementia probability and memory score among NHW and NHB in a new, national data set.
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spelling pubmed-41073772014-07-23 Validation of a polygenic risk score for dementia in black and white individuals Marden, Jessica R Walter, Stefan Tchetgen Tchetgen, Eric J Kawachi, Ichiro Glymour, M Maria Brain Behav Original Research OBJECTIVE: To determine whether a polygenic risk score for Alzheimer's disease (AD) predicts dementia probability and memory functioning in non-Hispanic black (NHB) and non-Hispanic white (NHW) participants from a sample not used in previous genome-wide association studies. METHODS: Non-Hispanic white and NHB Health and Retirement Study (HRS) participants provided genetic information and either a composite memory score (n = 10,401) or a dementia probability score (n = 7690). Dementia probability score was estimated for participants' age 65+ from 2006 to 2010, while memory score was available for participants age 50+. We calculated AD genetic risk scores (AD-GRS) based on 10 polymorphisms confirmed to predict AD, weighting alleles by beta coefficients reported in AlzGene meta-analyses. We used pooled logistic regression to estimate the association of the AD-GRS with dementia probability and generalized linear models to estimate its effect on memory score. RESULTS: Each 0.10 unit change in the AD-GRS was associated with larger relative effects on dementia among NHW aged 65+ (OR = 2.22; 95% CI: 1.79, 2.74; P < 0.001) than NHB (OR=1.33; 95% CI: 1.00, 1.77; P = 0.047), although additive effect estimates were similar. Each 0.10 unit change in the AD-GRS was associated with a −0.07 (95% CI: −0.09, −0.05; P < 0.001) SD difference in memory score among NHW aged 50+, but no significant differences among NHB (β = −0.01; 95% CI: −0.04, 0.01; P = 0.546). [Correction added on 29 July 2014, after first online publication: confidence intervalshave been amended.] The estimated effect of the GRS was significantly smaller among NHB than NHW (P < 0.05) for both outcomes. CONCLUSION: This analysis provides evidence for differential relative effects of the GRS on dementia probability and memory score among NHW and NHB in a new, national data set. Blackwell Publishing Ltd 2014-09 2014-07-18 /pmc/articles/PMC4107377/ /pubmed/25328845 http://dx.doi.org/10.1002/brb3.248 Text en © 2014 The Authors. Brain and Behavior published by Wiley Periodicals, Inc. http://creativecommons.org/licenses/by/3.0/ This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Marden, Jessica R
Walter, Stefan
Tchetgen Tchetgen, Eric J
Kawachi, Ichiro
Glymour, M Maria
Validation of a polygenic risk score for dementia in black and white individuals
title Validation of a polygenic risk score for dementia in black and white individuals
title_full Validation of a polygenic risk score for dementia in black and white individuals
title_fullStr Validation of a polygenic risk score for dementia in black and white individuals
title_full_unstemmed Validation of a polygenic risk score for dementia in black and white individuals
title_short Validation of a polygenic risk score for dementia in black and white individuals
title_sort validation of a polygenic risk score for dementia in black and white individuals
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4107377/
https://www.ncbi.nlm.nih.gov/pubmed/25328845
http://dx.doi.org/10.1002/brb3.248
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