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IMA Genome-F 2: Ceratocystis manginecans, Ceratocystis moniliformis, Diplodia sapinea: Draft genome sequences of Diplodia sapinea, Ceratocystis manginecans, and Ceratocystis moniliformis
The draft nuclear genomes of Diplodia sapinea, Ceratocystis moniliformis s. str., and C. manginecans are presented. Diplodia sapinea is an important shoot-blight and canker pathogen of Pinus spp., C. moniliformis is a saprobe associated with wounds on a wide range of woody angiosperms and C. mangine...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Mycological Association
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4107891/ https://www.ncbi.nlm.nih.gov/pubmed/25083413 http://dx.doi.org/10.5598/imafungus.2014.05.01.13 |
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author | van der Nest, Magriet A. Bihon, Wubetu De Vos, Lieschen Naidoo, Kershney Roodt, Danielle Rubagotti, Enrico Slippers, Bernard Steenkamp, Emma T. Wilken, P. Markus Wilson, Andrea Wingfield, Michael J. Wingfield, Brenda D. |
author_facet | van der Nest, Magriet A. Bihon, Wubetu De Vos, Lieschen Naidoo, Kershney Roodt, Danielle Rubagotti, Enrico Slippers, Bernard Steenkamp, Emma T. Wilken, P. Markus Wilson, Andrea Wingfield, Michael J. Wingfield, Brenda D. |
author_sort | van der Nest, Magriet A. |
collection | PubMed |
description | The draft nuclear genomes of Diplodia sapinea, Ceratocystis moniliformis s. str., and C. manginecans are presented. Diplodia sapinea is an important shoot-blight and canker pathogen of Pinus spp., C. moniliformis is a saprobe associated with wounds on a wide range of woody angiosperms and C. manginecans is a serious wilt pathogen of mango and Acacia mangium. The genome size of D. sapinea is estimated at 36.97 Mb and contains 13 020 predicted genes. Ceratocystis moniliformis includes 25.43 Mb and is predicted to encode at least 6 832 genes. This is smaller than that reported for the mango wilt pathogen C. manginecans which is 31.71 Mb and is predicted to encode at least 7 494 genes. The latter is thus more similar to C. fimbriata s.str., the type species of the genus. The genome sequences presented here provide an important resource to resolve issues pertaining to the taxonomy, biology and evolution of these fungi. |
format | Online Article Text |
id | pubmed-4107891 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | International Mycological Association |
record_format | MEDLINE/PubMed |
spelling | pubmed-41078912014-07-31 IMA Genome-F 2: Ceratocystis manginecans, Ceratocystis moniliformis, Diplodia sapinea: Draft genome sequences of Diplodia sapinea, Ceratocystis manginecans, and Ceratocystis moniliformis van der Nest, Magriet A. Bihon, Wubetu De Vos, Lieschen Naidoo, Kershney Roodt, Danielle Rubagotti, Enrico Slippers, Bernard Steenkamp, Emma T. Wilken, P. Markus Wilson, Andrea Wingfield, Michael J. Wingfield, Brenda D. IMA Fungus Article The draft nuclear genomes of Diplodia sapinea, Ceratocystis moniliformis s. str., and C. manginecans are presented. Diplodia sapinea is an important shoot-blight and canker pathogen of Pinus spp., C. moniliformis is a saprobe associated with wounds on a wide range of woody angiosperms and C. manginecans is a serious wilt pathogen of mango and Acacia mangium. The genome size of D. sapinea is estimated at 36.97 Mb and contains 13 020 predicted genes. Ceratocystis moniliformis includes 25.43 Mb and is predicted to encode at least 6 832 genes. This is smaller than that reported for the mango wilt pathogen C. manginecans which is 31.71 Mb and is predicted to encode at least 7 494 genes. The latter is thus more similar to C. fimbriata s.str., the type species of the genus. The genome sequences presented here provide an important resource to resolve issues pertaining to the taxonomy, biology and evolution of these fungi. International Mycological Association 2014-06-19 2014-06 /pmc/articles/PMC4107891/ /pubmed/25083413 http://dx.doi.org/10.5598/imafungus.2014.05.01.13 Text en © 2014 International Mycological Association http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode You are free to share - to copy, distribute and transmit the work, under the following conditions: Attribution: You must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work). Non-commercial: You may not use this work for commercial purposes. No derivative works: You may not alter, transform, or build upon this work. For any reuse or distribution, you must make clear to others the license terms of this work, which can be found at http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode. Any of the above conditions can be waived if you get permission from the copyright holder. Nothing in this license impairs or restricts the author’s moral rights. |
spellingShingle | Article van der Nest, Magriet A. Bihon, Wubetu De Vos, Lieschen Naidoo, Kershney Roodt, Danielle Rubagotti, Enrico Slippers, Bernard Steenkamp, Emma T. Wilken, P. Markus Wilson, Andrea Wingfield, Michael J. Wingfield, Brenda D. IMA Genome-F 2: Ceratocystis manginecans, Ceratocystis moniliformis, Diplodia sapinea: Draft genome sequences of Diplodia sapinea, Ceratocystis manginecans, and Ceratocystis moniliformis |
title | IMA Genome-F 2: Ceratocystis manginecans, Ceratocystis moniliformis, Diplodia sapinea: Draft genome sequences of Diplodia sapinea, Ceratocystis manginecans, and Ceratocystis moniliformis |
title_full | IMA Genome-F 2: Ceratocystis manginecans, Ceratocystis moniliformis, Diplodia sapinea: Draft genome sequences of Diplodia sapinea, Ceratocystis manginecans, and Ceratocystis moniliformis |
title_fullStr | IMA Genome-F 2: Ceratocystis manginecans, Ceratocystis moniliformis, Diplodia sapinea: Draft genome sequences of Diplodia sapinea, Ceratocystis manginecans, and Ceratocystis moniliformis |
title_full_unstemmed | IMA Genome-F 2: Ceratocystis manginecans, Ceratocystis moniliformis, Diplodia sapinea: Draft genome sequences of Diplodia sapinea, Ceratocystis manginecans, and Ceratocystis moniliformis |
title_short | IMA Genome-F 2: Ceratocystis manginecans, Ceratocystis moniliformis, Diplodia sapinea: Draft genome sequences of Diplodia sapinea, Ceratocystis manginecans, and Ceratocystis moniliformis |
title_sort | ima genome-f 2: ceratocystis manginecans, ceratocystis moniliformis, diplodia sapinea: draft genome sequences of diplodia sapinea, ceratocystis manginecans, and ceratocystis moniliformis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4107891/ https://www.ncbi.nlm.nih.gov/pubmed/25083413 http://dx.doi.org/10.5598/imafungus.2014.05.01.13 |
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