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Room-temperature macromolecular serial crystallography using synchrotron radiation

A new approach for collecting data from many hundreds of thousands of microcrystals using X-ray pulses from a free-electron laser has recently been developed. Referred to as serial crystallography, diffraction patterns are recorded at a constant rate as a suspension of protein crystals flows across...

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Autores principales: Stellato, Francesco, Oberthür, Dominik, Liang, Mengning, Bean, Richard, Gati, Cornelius, Yefanov, Oleksandr, Barty, Anton, Burkhardt, Anja, Fischer, Pontus, Galli, Lorenzo, Kirian, Richard A., Meyer, Jan, Panneerselvam, Saravanan, Yoon, Chun Hong, Chervinskii, Fedor, Speller, Emily, White, Thomas A., Betzel, Christian, Meents, Alke, Chapman, Henry N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4107920/
https://www.ncbi.nlm.nih.gov/pubmed/25075341
http://dx.doi.org/10.1107/S2052252514010070
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author Stellato, Francesco
Oberthür, Dominik
Liang, Mengning
Bean, Richard
Gati, Cornelius
Yefanov, Oleksandr
Barty, Anton
Burkhardt, Anja
Fischer, Pontus
Galli, Lorenzo
Kirian, Richard A.
Meyer, Jan
Panneerselvam, Saravanan
Yoon, Chun Hong
Chervinskii, Fedor
Speller, Emily
White, Thomas A.
Betzel, Christian
Meents, Alke
Chapman, Henry N.
author_facet Stellato, Francesco
Oberthür, Dominik
Liang, Mengning
Bean, Richard
Gati, Cornelius
Yefanov, Oleksandr
Barty, Anton
Burkhardt, Anja
Fischer, Pontus
Galli, Lorenzo
Kirian, Richard A.
Meyer, Jan
Panneerselvam, Saravanan
Yoon, Chun Hong
Chervinskii, Fedor
Speller, Emily
White, Thomas A.
Betzel, Christian
Meents, Alke
Chapman, Henry N.
author_sort Stellato, Francesco
collection PubMed
description A new approach for collecting data from many hundreds of thousands of microcrystals using X-ray pulses from a free-electron laser has recently been developed. Referred to as serial crystallography, diffraction patterns are recorded at a constant rate as a suspension of protein crystals flows across the path of an X-ray beam. Events that by chance contain single-crystal diffraction patterns are retained, then indexed and merged to form a three-dimensional set of reflection intensities for structure determination. This approach relies upon several innovations: an intense X-ray beam; a fast detector system; a means to rapidly flow a suspension of crystals across the X-ray beam; and the computational infrastructure to process the large volume of data. Originally conceived for radiation-damage-free measurements with ultrafast X-ray pulses, the same methods can be employed with synchrotron radiation. As in powder diffraction, the averaging of thousands of observations per Bragg peak may improve the ratio of signal to noise of low-dose exposures. Here, it is shown that this paradigm can be implemented for room-temperature data collection using synchrotron radiation and exposure times of less than 3 ms. Using lysozyme microcrystals as a model system, over 40 000 single-crystal diffraction patterns were obtained and merged to produce a structural model that could be refined to 2.1 Å resolution. The resulting electron density is in excellent agreement with that obtained using standard X-ray data collection techniques. With further improvements the method is well suited for even shorter exposures at future and upgraded synchrotron radiation facilities that may deliver beams with 1000 times higher brightness than they currently produce.
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spelling pubmed-41079202014-07-28 Room-temperature macromolecular serial crystallography using synchrotron radiation Stellato, Francesco Oberthür, Dominik Liang, Mengning Bean, Richard Gati, Cornelius Yefanov, Oleksandr Barty, Anton Burkhardt, Anja Fischer, Pontus Galli, Lorenzo Kirian, Richard A. Meyer, Jan Panneerselvam, Saravanan Yoon, Chun Hong Chervinskii, Fedor Speller, Emily White, Thomas A. Betzel, Christian Meents, Alke Chapman, Henry N. IUCrJ Research Letters A new approach for collecting data from many hundreds of thousands of microcrystals using X-ray pulses from a free-electron laser has recently been developed. Referred to as serial crystallography, diffraction patterns are recorded at a constant rate as a suspension of protein crystals flows across the path of an X-ray beam. Events that by chance contain single-crystal diffraction patterns are retained, then indexed and merged to form a three-dimensional set of reflection intensities for structure determination. This approach relies upon several innovations: an intense X-ray beam; a fast detector system; a means to rapidly flow a suspension of crystals across the X-ray beam; and the computational infrastructure to process the large volume of data. Originally conceived for radiation-damage-free measurements with ultrafast X-ray pulses, the same methods can be employed with synchrotron radiation. As in powder diffraction, the averaging of thousands of observations per Bragg peak may improve the ratio of signal to noise of low-dose exposures. Here, it is shown that this paradigm can be implemented for room-temperature data collection using synchrotron radiation and exposure times of less than 3 ms. Using lysozyme microcrystals as a model system, over 40 000 single-crystal diffraction patterns were obtained and merged to produce a structural model that could be refined to 2.1 Å resolution. The resulting electron density is in excellent agreement with that obtained using standard X-ray data collection techniques. With further improvements the method is well suited for even shorter exposures at future and upgraded synchrotron radiation facilities that may deliver beams with 1000 times higher brightness than they currently produce. International Union of Crystallography 2014-05-30 /pmc/articles/PMC4107920/ /pubmed/25075341 http://dx.doi.org/10.1107/S2052252514010070 Text en © Francesco Stellato et al. 2014 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Letters
Stellato, Francesco
Oberthür, Dominik
Liang, Mengning
Bean, Richard
Gati, Cornelius
Yefanov, Oleksandr
Barty, Anton
Burkhardt, Anja
Fischer, Pontus
Galli, Lorenzo
Kirian, Richard A.
Meyer, Jan
Panneerselvam, Saravanan
Yoon, Chun Hong
Chervinskii, Fedor
Speller, Emily
White, Thomas A.
Betzel, Christian
Meents, Alke
Chapman, Henry N.
Room-temperature macromolecular serial crystallography using synchrotron radiation
title Room-temperature macromolecular serial crystallography using synchrotron radiation
title_full Room-temperature macromolecular serial crystallography using synchrotron radiation
title_fullStr Room-temperature macromolecular serial crystallography using synchrotron radiation
title_full_unstemmed Room-temperature macromolecular serial crystallography using synchrotron radiation
title_short Room-temperature macromolecular serial crystallography using synchrotron radiation
title_sort room-temperature macromolecular serial crystallography using synchrotron radiation
topic Research Letters
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4107920/
https://www.ncbi.nlm.nih.gov/pubmed/25075341
http://dx.doi.org/10.1107/S2052252514010070
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