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Aniline–phenol recognition: from solution through supramolecular synthons to cocrystals

Aniline–phenol recognition is studied in the crystal engineering context in several 1:1 cocrystals that contain a closed cyclic hydrogen-bonded [⋯O—H⋯N—H⋯](2) tetramer supramolecular synthon (II). Twelve cocrystals of 3,4,5- and 2,3,4-trichlorophenol with one of eight halogenated anilines have been...

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Autores principales: Mukherjee, Arijit, Dixit, Karuna, Sarma, Siddhartha P., Desiraju, Gautam R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4107923/
https://www.ncbi.nlm.nih.gov/pubmed/25075344
http://dx.doi.org/10.1107/S2052252514012081
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author Mukherjee, Arijit
Dixit, Karuna
Sarma, Siddhartha P.
Desiraju, Gautam R.
author_facet Mukherjee, Arijit
Dixit, Karuna
Sarma, Siddhartha P.
Desiraju, Gautam R.
author_sort Mukherjee, Arijit
collection PubMed
description Aniline–phenol recognition is studied in the crystal engineering context in several 1:1 cocrystals that contain a closed cyclic hydrogen-bonded [⋯O—H⋯N—H⋯](2) tetramer supramolecular synthon (II). Twelve cocrystals of 3,4,5- and 2,3,4-trichlorophenol with one of eight halogenated anilines have been characterized. Ten of these cocrystals contain an extended octamer synthon that is assembled with hydrogen bonding and π⋯π stacking that defines a Long-Range Synthon Aufbau Module (LSAM). The design strategy is, therefore, based on the construction and transferability of the LSAM, which is a dimer of tetramers. Using the LSAM concept, two short cell axes in the crystal structures can be predicted. Whilst one of them is dictated by synthon II, the other one is dominated by π⋯π interactions. The third cell axis can also be predicted, in some cases, by systematic tuning of the halogen bonds. The design strategy is also verified in cocrystals of non-halogenated precursors. The observation of this large synthon in so many structures points to its stability and possible existence in solution. To this end, one-dimensional (1)H and (15)N NMR studies, performed on the 3,4,5-trichlorophenol–3,5-dichloroaniline cocrystal in CDCl(3), show characteristic downfield shifts that point to a π⋯π stacked structure and to the robustness of the hydrogen-bonded aggregates. Nuclear Overhauser effects point to hydrogen bonding between aniline and phenol molecules in the aggregates. Diffusion-ordered spectroscopy and T (1) inversion recovery experiments show that stacking is present in concentrated solution and lost at a certain dilution. A sequence of events is therefore established: molecules of the aniline and the phenol associate via hydrogen bonding to form tetramers, and tetramers subsequently stack to form octamers.
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spelling pubmed-41079232014-07-28 Aniline–phenol recognition: from solution through supramolecular synthons to cocrystals Mukherjee, Arijit Dixit, Karuna Sarma, Siddhartha P. Desiraju, Gautam R. IUCrJ Research Papers Aniline–phenol recognition is studied in the crystal engineering context in several 1:1 cocrystals that contain a closed cyclic hydrogen-bonded [⋯O—H⋯N—H⋯](2) tetramer supramolecular synthon (II). Twelve cocrystals of 3,4,5- and 2,3,4-trichlorophenol with one of eight halogenated anilines have been characterized. Ten of these cocrystals contain an extended octamer synthon that is assembled with hydrogen bonding and π⋯π stacking that defines a Long-Range Synthon Aufbau Module (LSAM). The design strategy is, therefore, based on the construction and transferability of the LSAM, which is a dimer of tetramers. Using the LSAM concept, two short cell axes in the crystal structures can be predicted. Whilst one of them is dictated by synthon II, the other one is dominated by π⋯π interactions. The third cell axis can also be predicted, in some cases, by systematic tuning of the halogen bonds. The design strategy is also verified in cocrystals of non-halogenated precursors. The observation of this large synthon in so many structures points to its stability and possible existence in solution. To this end, one-dimensional (1)H and (15)N NMR studies, performed on the 3,4,5-trichlorophenol–3,5-dichloroaniline cocrystal in CDCl(3), show characteristic downfield shifts that point to a π⋯π stacked structure and to the robustness of the hydrogen-bonded aggregates. Nuclear Overhauser effects point to hydrogen bonding between aniline and phenol molecules in the aggregates. Diffusion-ordered spectroscopy and T (1) inversion recovery experiments show that stacking is present in concentrated solution and lost at a certain dilution. A sequence of events is therefore established: molecules of the aniline and the phenol associate via hydrogen bonding to form tetramers, and tetramers subsequently stack to form octamers. International Union of Crystallography 2014-06-12 /pmc/articles/PMC4107923/ /pubmed/25075344 http://dx.doi.org/10.1107/S2052252514012081 Text en © Arijit Mukherjee et al. 2014 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Mukherjee, Arijit
Dixit, Karuna
Sarma, Siddhartha P.
Desiraju, Gautam R.
Aniline–phenol recognition: from solution through supramolecular synthons to cocrystals
title Aniline–phenol recognition: from solution through supramolecular synthons to cocrystals
title_full Aniline–phenol recognition: from solution through supramolecular synthons to cocrystals
title_fullStr Aniline–phenol recognition: from solution through supramolecular synthons to cocrystals
title_full_unstemmed Aniline–phenol recognition: from solution through supramolecular synthons to cocrystals
title_short Aniline–phenol recognition: from solution through supramolecular synthons to cocrystals
title_sort aniline–phenol recognition: from solution through supramolecular synthons to cocrystals
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4107923/
https://www.ncbi.nlm.nih.gov/pubmed/25075344
http://dx.doi.org/10.1107/S2052252514012081
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