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l-Galactose Metabolism in Bacteroides vulgatus from the Human Gut Microbiota

[Image: see text] A previously unknown metabolic pathway for the utilization of l-galactose was discovered in a prevalent gut bacterium, Bacteroides vulgatus. The new pathway consists of three previously uncharacterized enzymes that were found to be responsible for the conversion of l-galactose to d...

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Autores principales: Hobbs, Merlin Eric, Williams, Howard J., Hillerich, Brandan, Almo, Steven C., Raushel, Frank M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2014
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4108180/
https://www.ncbi.nlm.nih.gov/pubmed/24963813
http://dx.doi.org/10.1021/bi500656m
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author Hobbs, Merlin Eric
Williams, Howard J.
Hillerich, Brandan
Almo, Steven C.
Raushel, Frank M.
author_facet Hobbs, Merlin Eric
Williams, Howard J.
Hillerich, Brandan
Almo, Steven C.
Raushel, Frank M.
author_sort Hobbs, Merlin Eric
collection PubMed
description [Image: see text] A previously unknown metabolic pathway for the utilization of l-galactose was discovered in a prevalent gut bacterium, Bacteroides vulgatus. The new pathway consists of three previously uncharacterized enzymes that were found to be responsible for the conversion of l-galactose to d-tagaturonate. Bvu0219 (l-galactose dehydrogenase) was determined to oxidize l-galactose to l-galactono-1,5-lactone with k(cat) and k(cat)/K(m) values of 21 s(–1) and 2.0 × 10(5) M(–1) s(–1), respectively. The kinetic product of Bvu0219 is rapidly converted nonenzymatically to the thermodynamically more stable l-galactono-1,4-lactone. Bvu0220 (l-galactono-1,5-lactonase) hydrolyzes both the kinetic and thermodynamic products of Bvu0219 to l-galactonate. However, l-galactono-1,5-lactone is estimated to be hydrolyzed 300-fold faster than its thermodynamically more stable counterpart, l-galactono-1,4-lactone. In the final step of this pathway, Bvu0222 (l-galactonate dehydrogenase) oxidizes l-galactonate to d-tagaturonate with k(cat) and k(cat)/K(m) values of 0.6 s(–1) and 1.7 × 10(4) M(–1) s(–1), respectively. In the reverse direction, d-tagaturonate is reduced to l-galactonate with values of k(cat) and k(cat)/K(m) of 90 s(–1) and 1.6 × 10(5) M(–1) s(–1), respectively. d-Tagaturonate is subsequently converted to d-glyceraldehyde and pyruvate through enzymes encoded within the degradation pathway for d-glucuronate and d-galacturonate.
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spelling pubmed-41081802015-06-25 l-Galactose Metabolism in Bacteroides vulgatus from the Human Gut Microbiota Hobbs, Merlin Eric Williams, Howard J. Hillerich, Brandan Almo, Steven C. Raushel, Frank M. Biochemistry [Image: see text] A previously unknown metabolic pathway for the utilization of l-galactose was discovered in a prevalent gut bacterium, Bacteroides vulgatus. The new pathway consists of three previously uncharacterized enzymes that were found to be responsible for the conversion of l-galactose to d-tagaturonate. Bvu0219 (l-galactose dehydrogenase) was determined to oxidize l-galactose to l-galactono-1,5-lactone with k(cat) and k(cat)/K(m) values of 21 s(–1) and 2.0 × 10(5) M(–1) s(–1), respectively. The kinetic product of Bvu0219 is rapidly converted nonenzymatically to the thermodynamically more stable l-galactono-1,4-lactone. Bvu0220 (l-galactono-1,5-lactonase) hydrolyzes both the kinetic and thermodynamic products of Bvu0219 to l-galactonate. However, l-galactono-1,5-lactone is estimated to be hydrolyzed 300-fold faster than its thermodynamically more stable counterpart, l-galactono-1,4-lactone. In the final step of this pathway, Bvu0222 (l-galactonate dehydrogenase) oxidizes l-galactonate to d-tagaturonate with k(cat) and k(cat)/K(m) values of 0.6 s(–1) and 1.7 × 10(4) M(–1) s(–1), respectively. In the reverse direction, d-tagaturonate is reduced to l-galactonate with values of k(cat) and k(cat)/K(m) of 90 s(–1) and 1.6 × 10(5) M(–1) s(–1), respectively. d-Tagaturonate is subsequently converted to d-glyceraldehyde and pyruvate through enzymes encoded within the degradation pathway for d-glucuronate and d-galacturonate. American Chemical Society 2014-06-25 2014-07-22 /pmc/articles/PMC4108180/ /pubmed/24963813 http://dx.doi.org/10.1021/bi500656m Text en Copyright © 2014 American Chemical Society Terms of Use (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html)
spellingShingle Hobbs, Merlin Eric
Williams, Howard J.
Hillerich, Brandan
Almo, Steven C.
Raushel, Frank M.
l-Galactose Metabolism in Bacteroides vulgatus from the Human Gut Microbiota
title l-Galactose Metabolism in Bacteroides vulgatus from the Human Gut Microbiota
title_full l-Galactose Metabolism in Bacteroides vulgatus from the Human Gut Microbiota
title_fullStr l-Galactose Metabolism in Bacteroides vulgatus from the Human Gut Microbiota
title_full_unstemmed l-Galactose Metabolism in Bacteroides vulgatus from the Human Gut Microbiota
title_short l-Galactose Metabolism in Bacteroides vulgatus from the Human Gut Microbiota
title_sort l-galactose metabolism in bacteroides vulgatus from the human gut microbiota
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4108180/
https://www.ncbi.nlm.nih.gov/pubmed/24963813
http://dx.doi.org/10.1021/bi500656m
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