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l-Galactose Metabolism in Bacteroides vulgatus from the Human Gut Microbiota
[Image: see text] A previously unknown metabolic pathway for the utilization of l-galactose was discovered in a prevalent gut bacterium, Bacteroides vulgatus. The new pathway consists of three previously uncharacterized enzymes that were found to be responsible for the conversion of l-galactose to d...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American
Chemical Society
2014
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4108180/ https://www.ncbi.nlm.nih.gov/pubmed/24963813 http://dx.doi.org/10.1021/bi500656m |
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author | Hobbs, Merlin Eric Williams, Howard J. Hillerich, Brandan Almo, Steven C. Raushel, Frank M. |
author_facet | Hobbs, Merlin Eric Williams, Howard J. Hillerich, Brandan Almo, Steven C. Raushel, Frank M. |
author_sort | Hobbs, Merlin Eric |
collection | PubMed |
description | [Image: see text] A previously unknown metabolic pathway for the utilization of l-galactose was discovered in a prevalent gut bacterium, Bacteroides vulgatus. The new pathway consists of three previously uncharacterized enzymes that were found to be responsible for the conversion of l-galactose to d-tagaturonate. Bvu0219 (l-galactose dehydrogenase) was determined to oxidize l-galactose to l-galactono-1,5-lactone with k(cat) and k(cat)/K(m) values of 21 s(–1) and 2.0 × 10(5) M(–1) s(–1), respectively. The kinetic product of Bvu0219 is rapidly converted nonenzymatically to the thermodynamically more stable l-galactono-1,4-lactone. Bvu0220 (l-galactono-1,5-lactonase) hydrolyzes both the kinetic and thermodynamic products of Bvu0219 to l-galactonate. However, l-galactono-1,5-lactone is estimated to be hydrolyzed 300-fold faster than its thermodynamically more stable counterpart, l-galactono-1,4-lactone. In the final step of this pathway, Bvu0222 (l-galactonate dehydrogenase) oxidizes l-galactonate to d-tagaturonate with k(cat) and k(cat)/K(m) values of 0.6 s(–1) and 1.7 × 10(4) M(–1) s(–1), respectively. In the reverse direction, d-tagaturonate is reduced to l-galactonate with values of k(cat) and k(cat)/K(m) of 90 s(–1) and 1.6 × 10(5) M(–1) s(–1), respectively. d-Tagaturonate is subsequently converted to d-glyceraldehyde and pyruvate through enzymes encoded within the degradation pathway for d-glucuronate and d-galacturonate. |
format | Online Article Text |
id | pubmed-4108180 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | American
Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-41081802015-06-25 l-Galactose Metabolism in Bacteroides vulgatus from the Human Gut Microbiota Hobbs, Merlin Eric Williams, Howard J. Hillerich, Brandan Almo, Steven C. Raushel, Frank M. Biochemistry [Image: see text] A previously unknown metabolic pathway for the utilization of l-galactose was discovered in a prevalent gut bacterium, Bacteroides vulgatus. The new pathway consists of three previously uncharacterized enzymes that were found to be responsible for the conversion of l-galactose to d-tagaturonate. Bvu0219 (l-galactose dehydrogenase) was determined to oxidize l-galactose to l-galactono-1,5-lactone with k(cat) and k(cat)/K(m) values of 21 s(–1) and 2.0 × 10(5) M(–1) s(–1), respectively. The kinetic product of Bvu0219 is rapidly converted nonenzymatically to the thermodynamically more stable l-galactono-1,4-lactone. Bvu0220 (l-galactono-1,5-lactonase) hydrolyzes both the kinetic and thermodynamic products of Bvu0219 to l-galactonate. However, l-galactono-1,5-lactone is estimated to be hydrolyzed 300-fold faster than its thermodynamically more stable counterpart, l-galactono-1,4-lactone. In the final step of this pathway, Bvu0222 (l-galactonate dehydrogenase) oxidizes l-galactonate to d-tagaturonate with k(cat) and k(cat)/K(m) values of 0.6 s(–1) and 1.7 × 10(4) M(–1) s(–1), respectively. In the reverse direction, d-tagaturonate is reduced to l-galactonate with values of k(cat) and k(cat)/K(m) of 90 s(–1) and 1.6 × 10(5) M(–1) s(–1), respectively. d-Tagaturonate is subsequently converted to d-glyceraldehyde and pyruvate through enzymes encoded within the degradation pathway for d-glucuronate and d-galacturonate. American Chemical Society 2014-06-25 2014-07-22 /pmc/articles/PMC4108180/ /pubmed/24963813 http://dx.doi.org/10.1021/bi500656m Text en Copyright © 2014 American Chemical Society Terms of Use (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) |
spellingShingle | Hobbs, Merlin Eric Williams, Howard J. Hillerich, Brandan Almo, Steven C. Raushel, Frank M. l-Galactose Metabolism in Bacteroides vulgatus from the Human Gut Microbiota |
title | l-Galactose Metabolism in Bacteroides vulgatus from the Human Gut Microbiota |
title_full | l-Galactose Metabolism in Bacteroides vulgatus from the Human Gut Microbiota |
title_fullStr | l-Galactose Metabolism in Bacteroides vulgatus from the Human Gut Microbiota |
title_full_unstemmed | l-Galactose Metabolism in Bacteroides vulgatus from the Human Gut Microbiota |
title_short | l-Galactose Metabolism in Bacteroides vulgatus from the Human Gut Microbiota |
title_sort | l-galactose metabolism in bacteroides vulgatus from the human gut microbiota |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4108180/ https://www.ncbi.nlm.nih.gov/pubmed/24963813 http://dx.doi.org/10.1021/bi500656m |
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