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A Systems Biology-Based Approach to Uncovering the Molecular Mechanisms Underlying the Effects of Dragon's Blood Tablet in Colitis, Involving the Integration of Chemical Analysis, ADME Prediction, and Network Pharmacology

Traditional Chinese medicine (TCM) is one of the oldest East Asian medical systems. The present study adopted a systems biology-based approach to provide new insights relating to the active constituents and molecular mechanisms underlying the effects of dragon's blood (DB) tablets for the treat...

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Autores principales: Xu, Haiyu, Zhang, Yanqiong, Lei, Yun, Gao, Xiumei, Zhai, Huaqiang, Lin, Na, Tang, Shihuan, Liang, Rixin, Ma, Yan, Li, Defeng, Zhang, Yi, Zhu, Guangrong, Yang, Hongjun, Huang, Luqi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4113278/
https://www.ncbi.nlm.nih.gov/pubmed/25068885
http://dx.doi.org/10.1371/journal.pone.0101432
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author Xu, Haiyu
Zhang, Yanqiong
Lei, Yun
Gao, Xiumei
Zhai, Huaqiang
Lin, Na
Tang, Shihuan
Liang, Rixin
Ma, Yan
Li, Defeng
Zhang, Yi
Zhu, Guangrong
Yang, Hongjun
Huang, Luqi
author_facet Xu, Haiyu
Zhang, Yanqiong
Lei, Yun
Gao, Xiumei
Zhai, Huaqiang
Lin, Na
Tang, Shihuan
Liang, Rixin
Ma, Yan
Li, Defeng
Zhang, Yi
Zhu, Guangrong
Yang, Hongjun
Huang, Luqi
author_sort Xu, Haiyu
collection PubMed
description Traditional Chinese medicine (TCM) is one of the oldest East Asian medical systems. The present study adopted a systems biology-based approach to provide new insights relating to the active constituents and molecular mechanisms underlying the effects of dragon's blood (DB) tablets for the treatment of colitis. This study integrated chemical analysis, prediction of absorption, distribution, metabolism, and excretion (ADME), and network pharmacology. Firstly, a rapid, reliable, and accurate ultra-performance liquid chromatography-electrospray ionization-tandem mass spectrometry method was employed to identify 48 components of DB tablets. In silico prediction of the passive absorption of these compounds, based on Caco-2 cell permeability, and their P450 metabolism enabled the identification of 22 potentially absorbed components and 8 metabolites. Finally, networks were constructed to analyze interactions between these DB components/metabolites absorbed and their putative targets, and between the putative DB targets and known therapeutic targets for colitis. This study provided a great opportunity to deepen the understanding of the complex pharmacological mechanisms underlying the effects of DB in colitis treatment.
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spelling pubmed-41132782014-08-04 A Systems Biology-Based Approach to Uncovering the Molecular Mechanisms Underlying the Effects of Dragon's Blood Tablet in Colitis, Involving the Integration of Chemical Analysis, ADME Prediction, and Network Pharmacology Xu, Haiyu Zhang, Yanqiong Lei, Yun Gao, Xiumei Zhai, Huaqiang Lin, Na Tang, Shihuan Liang, Rixin Ma, Yan Li, Defeng Zhang, Yi Zhu, Guangrong Yang, Hongjun Huang, Luqi PLoS One Research Article Traditional Chinese medicine (TCM) is one of the oldest East Asian medical systems. The present study adopted a systems biology-based approach to provide new insights relating to the active constituents and molecular mechanisms underlying the effects of dragon's blood (DB) tablets for the treatment of colitis. This study integrated chemical analysis, prediction of absorption, distribution, metabolism, and excretion (ADME), and network pharmacology. Firstly, a rapid, reliable, and accurate ultra-performance liquid chromatography-electrospray ionization-tandem mass spectrometry method was employed to identify 48 components of DB tablets. In silico prediction of the passive absorption of these compounds, based on Caco-2 cell permeability, and their P450 metabolism enabled the identification of 22 potentially absorbed components and 8 metabolites. Finally, networks were constructed to analyze interactions between these DB components/metabolites absorbed and their putative targets, and between the putative DB targets and known therapeutic targets for colitis. This study provided a great opportunity to deepen the understanding of the complex pharmacological mechanisms underlying the effects of DB in colitis treatment. Public Library of Science 2014-07-28 /pmc/articles/PMC4113278/ /pubmed/25068885 http://dx.doi.org/10.1371/journal.pone.0101432 Text en © 2014 Xu et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Xu, Haiyu
Zhang, Yanqiong
Lei, Yun
Gao, Xiumei
Zhai, Huaqiang
Lin, Na
Tang, Shihuan
Liang, Rixin
Ma, Yan
Li, Defeng
Zhang, Yi
Zhu, Guangrong
Yang, Hongjun
Huang, Luqi
A Systems Biology-Based Approach to Uncovering the Molecular Mechanisms Underlying the Effects of Dragon's Blood Tablet in Colitis, Involving the Integration of Chemical Analysis, ADME Prediction, and Network Pharmacology
title A Systems Biology-Based Approach to Uncovering the Molecular Mechanisms Underlying the Effects of Dragon's Blood Tablet in Colitis, Involving the Integration of Chemical Analysis, ADME Prediction, and Network Pharmacology
title_full A Systems Biology-Based Approach to Uncovering the Molecular Mechanisms Underlying the Effects of Dragon's Blood Tablet in Colitis, Involving the Integration of Chemical Analysis, ADME Prediction, and Network Pharmacology
title_fullStr A Systems Biology-Based Approach to Uncovering the Molecular Mechanisms Underlying the Effects of Dragon's Blood Tablet in Colitis, Involving the Integration of Chemical Analysis, ADME Prediction, and Network Pharmacology
title_full_unstemmed A Systems Biology-Based Approach to Uncovering the Molecular Mechanisms Underlying the Effects of Dragon's Blood Tablet in Colitis, Involving the Integration of Chemical Analysis, ADME Prediction, and Network Pharmacology
title_short A Systems Biology-Based Approach to Uncovering the Molecular Mechanisms Underlying the Effects of Dragon's Blood Tablet in Colitis, Involving the Integration of Chemical Analysis, ADME Prediction, and Network Pharmacology
title_sort systems biology-based approach to uncovering the molecular mechanisms underlying the effects of dragon's blood tablet in colitis, involving the integration of chemical analysis, adme prediction, and network pharmacology
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4113278/
https://www.ncbi.nlm.nih.gov/pubmed/25068885
http://dx.doi.org/10.1371/journal.pone.0101432
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