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Temperate Pine Barrens and Tropical Rain Forests Are Both Rich in Undescribed Fungi

Most of fungal biodiversity on Earth remains unknown especially in the unexplored habitats. In this study, we compared fungi associated with grass (Poaceae) roots from two ecosystems: the temperate pine barrens in New Jersey, USA and tropical rain forests in Yunnan, China, using the same sampling, i...

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Autores principales: Luo, Jing, Walsh, Emily, Naik, Abhishek, Zhuang, Wenying, Zhang, Keqin, Cai, Lei, Zhang, Ning
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4114982/
https://www.ncbi.nlm.nih.gov/pubmed/25072783
http://dx.doi.org/10.1371/journal.pone.0103753
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author Luo, Jing
Walsh, Emily
Naik, Abhishek
Zhuang, Wenying
Zhang, Keqin
Cai, Lei
Zhang, Ning
author_facet Luo, Jing
Walsh, Emily
Naik, Abhishek
Zhuang, Wenying
Zhang, Keqin
Cai, Lei
Zhang, Ning
author_sort Luo, Jing
collection PubMed
description Most of fungal biodiversity on Earth remains unknown especially in the unexplored habitats. In this study, we compared fungi associated with grass (Poaceae) roots from two ecosystems: the temperate pine barrens in New Jersey, USA and tropical rain forests in Yunnan, China, using the same sampling, isolation and species identification methods. A total of 426 fungal isolates were obtained from 1600 root segments from 80 grass samples. Based on the internal transcribed spacer (ITS) sequences and morphological characteristics, a total of 85 fungal species (OTUs) belonging in 45 genera, 23 families, 16 orders, and 6 classes were identified, among which the pine barrens had 38 and Yunnan had 56 species, with only 9 species in common. The finding that grass roots in the tropical forests harbor higher fungal species diversity supports that tropical forests are fungal biodiversity hotspots. Sordariomycetes was dominant in both places but more Leotiomycetes were found in the pine barrens than Yunnan, which may play a role in the acidic and oligotrophic pine barrens ecosystem. Equal number of undescribed fungal species were discovered from the two sampled ecosystems, although the tropical Yunnan had more known fungal species. Pine barrens is a unique, unexplored ecosystem. Our finding suggests that sampling plants in such unexplored habitats will uncover novel fungi and that grass roots in pine barrens are one of the major reservoirs of novel fungi with about 47% being undescribed species.
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spelling pubmed-41149822014-08-04 Temperate Pine Barrens and Tropical Rain Forests Are Both Rich in Undescribed Fungi Luo, Jing Walsh, Emily Naik, Abhishek Zhuang, Wenying Zhang, Keqin Cai, Lei Zhang, Ning PLoS One Research Article Most of fungal biodiversity on Earth remains unknown especially in the unexplored habitats. In this study, we compared fungi associated with grass (Poaceae) roots from two ecosystems: the temperate pine barrens in New Jersey, USA and tropical rain forests in Yunnan, China, using the same sampling, isolation and species identification methods. A total of 426 fungal isolates were obtained from 1600 root segments from 80 grass samples. Based on the internal transcribed spacer (ITS) sequences and morphological characteristics, a total of 85 fungal species (OTUs) belonging in 45 genera, 23 families, 16 orders, and 6 classes were identified, among which the pine barrens had 38 and Yunnan had 56 species, with only 9 species in common. The finding that grass roots in the tropical forests harbor higher fungal species diversity supports that tropical forests are fungal biodiversity hotspots. Sordariomycetes was dominant in both places but more Leotiomycetes were found in the pine barrens than Yunnan, which may play a role in the acidic and oligotrophic pine barrens ecosystem. Equal number of undescribed fungal species were discovered from the two sampled ecosystems, although the tropical Yunnan had more known fungal species. Pine barrens is a unique, unexplored ecosystem. Our finding suggests that sampling plants in such unexplored habitats will uncover novel fungi and that grass roots in pine barrens are one of the major reservoirs of novel fungi with about 47% being undescribed species. Public Library of Science 2014-07-29 /pmc/articles/PMC4114982/ /pubmed/25072783 http://dx.doi.org/10.1371/journal.pone.0103753 Text en © 2014 Luo et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Luo, Jing
Walsh, Emily
Naik, Abhishek
Zhuang, Wenying
Zhang, Keqin
Cai, Lei
Zhang, Ning
Temperate Pine Barrens and Tropical Rain Forests Are Both Rich in Undescribed Fungi
title Temperate Pine Barrens and Tropical Rain Forests Are Both Rich in Undescribed Fungi
title_full Temperate Pine Barrens and Tropical Rain Forests Are Both Rich in Undescribed Fungi
title_fullStr Temperate Pine Barrens and Tropical Rain Forests Are Both Rich in Undescribed Fungi
title_full_unstemmed Temperate Pine Barrens and Tropical Rain Forests Are Both Rich in Undescribed Fungi
title_short Temperate Pine Barrens and Tropical Rain Forests Are Both Rich in Undescribed Fungi
title_sort temperate pine barrens and tropical rain forests are both rich in undescribed fungi
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4114982/
https://www.ncbi.nlm.nih.gov/pubmed/25072783
http://dx.doi.org/10.1371/journal.pone.0103753
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