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Analysis of Transcription Factor Network Underlying 3T3-L1 Adipocyte Differentiation
Lipid accumulation in adipocytes reflects a balance between enzymatic pathways leading to the formation and breakdown of esterified lipids, primarily triglycerides. This balance is extremely important, as both high and low lipid levels in adipocytes can have deleterious consequences. The enzymes res...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4116336/ https://www.ncbi.nlm.nih.gov/pubmed/25075860 http://dx.doi.org/10.1371/journal.pone.0100177 |
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author | Choi, KyungOh Ghaddar, Bassel Moya, Colby Shi, Hai Sridharan, Gautham V. Lee, Kyongbum Jayaraman, Arul |
author_facet | Choi, KyungOh Ghaddar, Bassel Moya, Colby Shi, Hai Sridharan, Gautham V. Lee, Kyongbum Jayaraman, Arul |
author_sort | Choi, KyungOh |
collection | PubMed |
description | Lipid accumulation in adipocytes reflects a balance between enzymatic pathways leading to the formation and breakdown of esterified lipids, primarily triglycerides. This balance is extremely important, as both high and low lipid levels in adipocytes can have deleterious consequences. The enzymes responsible for lipid synthesis and breakdown (lipogenesis and lipolysis, respectively) are regulated through the coordinated actions of several transcription factors (TFs). In this study, we examined the dynamics of several key transcription factors (TFs) - PPARγ, C/EBPβ, CREB, NFAT, FoxO1, and SREBP-1c - during adipogenic differentiation (week 1) and ensuing lipid accumulation. The activation profiles of these TFs at different times following induction of adipogenic differentiation were quantified using 3T3-L1 reporter cell lines constructed to secrete the Gaussia luciferase enzyme upon binding of a TF to its DNA binding element. The dynamics of the TFs was also modeled using a combination of logical gates and ordinary differential equations, where the logical gates were used to explore different combinations of activating inputs for PPARγ, C/EBPβ, and SREBP-1c. Comparisons of the experimental profiles and model simulations suggest that SREBP-1c could be independently activated by either insulin or PPARγ, whereas PPARγ activation required both C/EBPβ as well as a putative ligand. Parameter estimation and sensitivity analysis indicate that feedback activation of SREBP-1c by PPARγ is negligible in comparison to activation of SREBP-1c by insulin. On the other hand, the production of an activating ligand could quantitatively contribute to a sustained elevation in PPARγ activity. |
format | Online Article Text |
id | pubmed-4116336 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-41163362014-08-04 Analysis of Transcription Factor Network Underlying 3T3-L1 Adipocyte Differentiation Choi, KyungOh Ghaddar, Bassel Moya, Colby Shi, Hai Sridharan, Gautham V. Lee, Kyongbum Jayaraman, Arul PLoS One Research Article Lipid accumulation in adipocytes reflects a balance between enzymatic pathways leading to the formation and breakdown of esterified lipids, primarily triglycerides. This balance is extremely important, as both high and low lipid levels in adipocytes can have deleterious consequences. The enzymes responsible for lipid synthesis and breakdown (lipogenesis and lipolysis, respectively) are regulated through the coordinated actions of several transcription factors (TFs). In this study, we examined the dynamics of several key transcription factors (TFs) - PPARγ, C/EBPβ, CREB, NFAT, FoxO1, and SREBP-1c - during adipogenic differentiation (week 1) and ensuing lipid accumulation. The activation profiles of these TFs at different times following induction of adipogenic differentiation were quantified using 3T3-L1 reporter cell lines constructed to secrete the Gaussia luciferase enzyme upon binding of a TF to its DNA binding element. The dynamics of the TFs was also modeled using a combination of logical gates and ordinary differential equations, where the logical gates were used to explore different combinations of activating inputs for PPARγ, C/EBPβ, and SREBP-1c. Comparisons of the experimental profiles and model simulations suggest that SREBP-1c could be independently activated by either insulin or PPARγ, whereas PPARγ activation required both C/EBPβ as well as a putative ligand. Parameter estimation and sensitivity analysis indicate that feedback activation of SREBP-1c by PPARγ is negligible in comparison to activation of SREBP-1c by insulin. On the other hand, the production of an activating ligand could quantitatively contribute to a sustained elevation in PPARγ activity. Public Library of Science 2014-07-30 /pmc/articles/PMC4116336/ /pubmed/25075860 http://dx.doi.org/10.1371/journal.pone.0100177 Text en © 2014 Choi et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Choi, KyungOh Ghaddar, Bassel Moya, Colby Shi, Hai Sridharan, Gautham V. Lee, Kyongbum Jayaraman, Arul Analysis of Transcription Factor Network Underlying 3T3-L1 Adipocyte Differentiation |
title | Analysis of Transcription Factor Network Underlying 3T3-L1 Adipocyte Differentiation |
title_full | Analysis of Transcription Factor Network Underlying 3T3-L1 Adipocyte Differentiation |
title_fullStr | Analysis of Transcription Factor Network Underlying 3T3-L1 Adipocyte Differentiation |
title_full_unstemmed | Analysis of Transcription Factor Network Underlying 3T3-L1 Adipocyte Differentiation |
title_short | Analysis of Transcription Factor Network Underlying 3T3-L1 Adipocyte Differentiation |
title_sort | analysis of transcription factor network underlying 3t3-l1 adipocyte differentiation |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4116336/ https://www.ncbi.nlm.nih.gov/pubmed/25075860 http://dx.doi.org/10.1371/journal.pone.0100177 |
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