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Hydrophobin Film Structure for HFBI and HFBII and Mechanism for Accelerated Film Formation

Hydrophobins represent an important group of proteins from both a biological and nanotechnological standpoint. They are the means through which filamentous fungi affect their environment to promote growth, and their properties at interfaces have resulted in numerous applications. In our study we hav...

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Autores principales: Magarkar, Aniket, Mele, Nawel, Abdel-Rahman, Noha, Butcher, Sarah, Torkkeli, Mika, Serimaa, Ritva, Paananen, Arja, Linder, Markus, Bunker, Alex
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4117420/
https://www.ncbi.nlm.nih.gov/pubmed/25079355
http://dx.doi.org/10.1371/journal.pcbi.1003745
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author Magarkar, Aniket
Mele, Nawel
Abdel-Rahman, Noha
Butcher, Sarah
Torkkeli, Mika
Serimaa, Ritva
Paananen, Arja
Linder, Markus
Bunker, Alex
author_facet Magarkar, Aniket
Mele, Nawel
Abdel-Rahman, Noha
Butcher, Sarah
Torkkeli, Mika
Serimaa, Ritva
Paananen, Arja
Linder, Markus
Bunker, Alex
author_sort Magarkar, Aniket
collection PubMed
description Hydrophobins represent an important group of proteins from both a biological and nanotechnological standpoint. They are the means through which filamentous fungi affect their environment to promote growth, and their properties at interfaces have resulted in numerous applications. In our study we have combined protein docking, molecular dynamics simulation, and electron cryo-microscopy to gain atomistic level insight into the surface structure of films composed of two class II hydrophobins: HFBI and HFBII produced by Trichoderma reesei. Together our results suggest a unit cell composed of six proteins; however, our computational results suggest P6 symmetry, while our experimental results show P3 symmetry with a unit cell size of 56 Å. Our computational results indicate the possibility of an alternate ordering with a three protein unit cell with P3 symmetry and a smaller unit cell size, and we have used a Monte Carlo simulation of a spin model representing the hydrophobin film to show how this alternate metastable structure may play a role in increasing the rate of surface coverage by hydrophobin films, possibly indicating a mechanism of more general significance to both biology and nanotechnology.
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spelling pubmed-41174202014-08-04 Hydrophobin Film Structure for HFBI and HFBII and Mechanism for Accelerated Film Formation Magarkar, Aniket Mele, Nawel Abdel-Rahman, Noha Butcher, Sarah Torkkeli, Mika Serimaa, Ritva Paananen, Arja Linder, Markus Bunker, Alex PLoS Comput Biol Research Article Hydrophobins represent an important group of proteins from both a biological and nanotechnological standpoint. They are the means through which filamentous fungi affect their environment to promote growth, and their properties at interfaces have resulted in numerous applications. In our study we have combined protein docking, molecular dynamics simulation, and electron cryo-microscopy to gain atomistic level insight into the surface structure of films composed of two class II hydrophobins: HFBI and HFBII produced by Trichoderma reesei. Together our results suggest a unit cell composed of six proteins; however, our computational results suggest P6 symmetry, while our experimental results show P3 symmetry with a unit cell size of 56 Å. Our computational results indicate the possibility of an alternate ordering with a three protein unit cell with P3 symmetry and a smaller unit cell size, and we have used a Monte Carlo simulation of a spin model representing the hydrophobin film to show how this alternate metastable structure may play a role in increasing the rate of surface coverage by hydrophobin films, possibly indicating a mechanism of more general significance to both biology and nanotechnology. Public Library of Science 2014-07-31 /pmc/articles/PMC4117420/ /pubmed/25079355 http://dx.doi.org/10.1371/journal.pcbi.1003745 Text en © 2014 Magarkar et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Magarkar, Aniket
Mele, Nawel
Abdel-Rahman, Noha
Butcher, Sarah
Torkkeli, Mika
Serimaa, Ritva
Paananen, Arja
Linder, Markus
Bunker, Alex
Hydrophobin Film Structure for HFBI and HFBII and Mechanism for Accelerated Film Formation
title Hydrophobin Film Structure for HFBI and HFBII and Mechanism for Accelerated Film Formation
title_full Hydrophobin Film Structure for HFBI and HFBII and Mechanism for Accelerated Film Formation
title_fullStr Hydrophobin Film Structure for HFBI and HFBII and Mechanism for Accelerated Film Formation
title_full_unstemmed Hydrophobin Film Structure for HFBI and HFBII and Mechanism for Accelerated Film Formation
title_short Hydrophobin Film Structure for HFBI and HFBII and Mechanism for Accelerated Film Formation
title_sort hydrophobin film structure for hfbi and hfbii and mechanism for accelerated film formation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4117420/
https://www.ncbi.nlm.nih.gov/pubmed/25079355
http://dx.doi.org/10.1371/journal.pcbi.1003745
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