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Annexin A11 (ANXA11) gene polymorphisms are associated with sarcoidosis in a Han Chinese population: a case–control study

OBJECTIVES: To further identify the single-nucleotide polymorphisms (SNPs) that contribute to the genetic susceptibility to sarcoidosis, we examined the potential association between sarcoidosis and 15 SNPs of the ANXA11 gene. DESIGN: A case–control study. SETTING: A tuberculosis unit in a hospital...

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Autores principales: Feng, Xianjun, Zang, Shuzhi, Yang, Yanrong, Zhao, Shasha, Li, Yunxia, Gao, Xinyuan, Zhang, Ligong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BMJ Publishing Group 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4120255/
https://www.ncbi.nlm.nih.gov/pubmed/25056970
http://dx.doi.org/10.1136/bmjopen-2013-004466
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author Feng, Xianjun
Zang, Shuzhi
Yang, Yanrong
Zhao, Shasha
Li, Yunxia
Gao, Xinyuan
Zhang, Ligong
author_facet Feng, Xianjun
Zang, Shuzhi
Yang, Yanrong
Zhao, Shasha
Li, Yunxia
Gao, Xinyuan
Zhang, Ligong
author_sort Feng, Xianjun
collection PubMed
description OBJECTIVES: To further identify the single-nucleotide polymorphisms (SNPs) that contribute to the genetic susceptibility to sarcoidosis, we examined the potential association between sarcoidosis and 15 SNPs of the ANXA11 gene. DESIGN: A case–control study. SETTING: A tuberculosis unit in a hospital of the university in China. PARTICIPANTS: Participants included 412 patients with sarcoidosis and 418 healthy controls. METHODS: The selected SNPs were genotyped using the MALDI-TOF in the MassARRAY system. RESULTS: Statistically significant differences were found in the allelic or genotypic frequencies of the rs2789679, rs1049550 and rs2819941 in the ANXA11 gene between patients with sarcoidosis and controls. The rs2789679 A allele (p=0.00004, OR=1.42, 95% CI 1.17 to 1.73) and rs2819941 T allele (p=0.0006, OR=1.41, 95% CI 1.16 to 1.71) were significantly more frequent in patients with sarcoidosis compared with controls. The frequency of the rs1049550 T allele (p=0.000002, OR=0.61, 95% CI 0.49 to 0.74) in patients with sarcoidosis was significantly lower than that in controls. The multi-SNP model reveals that rs1049550 is the only independent SNP association effect after accounting for the other two marginally associated SNPs. In block 2 (rs1049550–rs2573351), the T–C haplotype occurred significantly less frequently (p=0.001), whereas the C–C haplotypes occurred more frequently (p=0.0001) in patients with sarcoidosis than controls. Furthermore, genotype frequency distribution revealed that, in rs1049550, the CC genotype was significantly more in patients with chest X-ray (CXR) stage I sarcoidosis than in patients with CXR stage II–IV sarcoidosis (p=0.012). CONCLUSIONS: These findings point to a role for the polymorphisms of ANXA11 in sarcoidosis in a Chinese Han population, and may be informative for future genetic studies on sarcoidosis.
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spelling pubmed-41202552014-08-05 Annexin A11 (ANXA11) gene polymorphisms are associated with sarcoidosis in a Han Chinese population: a case–control study Feng, Xianjun Zang, Shuzhi Yang, Yanrong Zhao, Shasha Li, Yunxia Gao, Xinyuan Zhang, Ligong BMJ Open Infectious Diseases OBJECTIVES: To further identify the single-nucleotide polymorphisms (SNPs) that contribute to the genetic susceptibility to sarcoidosis, we examined the potential association between sarcoidosis and 15 SNPs of the ANXA11 gene. DESIGN: A case–control study. SETTING: A tuberculosis unit in a hospital of the university in China. PARTICIPANTS: Participants included 412 patients with sarcoidosis and 418 healthy controls. METHODS: The selected SNPs were genotyped using the MALDI-TOF in the MassARRAY system. RESULTS: Statistically significant differences were found in the allelic or genotypic frequencies of the rs2789679, rs1049550 and rs2819941 in the ANXA11 gene between patients with sarcoidosis and controls. The rs2789679 A allele (p=0.00004, OR=1.42, 95% CI 1.17 to 1.73) and rs2819941 T allele (p=0.0006, OR=1.41, 95% CI 1.16 to 1.71) were significantly more frequent in patients with sarcoidosis compared with controls. The frequency of the rs1049550 T allele (p=0.000002, OR=0.61, 95% CI 0.49 to 0.74) in patients with sarcoidosis was significantly lower than that in controls. The multi-SNP model reveals that rs1049550 is the only independent SNP association effect after accounting for the other two marginally associated SNPs. In block 2 (rs1049550–rs2573351), the T–C haplotype occurred significantly less frequently (p=0.001), whereas the C–C haplotypes occurred more frequently (p=0.0001) in patients with sarcoidosis than controls. Furthermore, genotype frequency distribution revealed that, in rs1049550, the CC genotype was significantly more in patients with chest X-ray (CXR) stage I sarcoidosis than in patients with CXR stage II–IV sarcoidosis (p=0.012). CONCLUSIONS: These findings point to a role for the polymorphisms of ANXA11 in sarcoidosis in a Chinese Han population, and may be informative for future genetic studies on sarcoidosis. BMJ Publishing Group 2014-07-22 /pmc/articles/PMC4120255/ /pubmed/25056970 http://dx.doi.org/10.1136/bmjopen-2013-004466 Text en Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions This is an Open Access article distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 3.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial. See: http://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Infectious Diseases
Feng, Xianjun
Zang, Shuzhi
Yang, Yanrong
Zhao, Shasha
Li, Yunxia
Gao, Xinyuan
Zhang, Ligong
Annexin A11 (ANXA11) gene polymorphisms are associated with sarcoidosis in a Han Chinese population: a case–control study
title Annexin A11 (ANXA11) gene polymorphisms are associated with sarcoidosis in a Han Chinese population: a case–control study
title_full Annexin A11 (ANXA11) gene polymorphisms are associated with sarcoidosis in a Han Chinese population: a case–control study
title_fullStr Annexin A11 (ANXA11) gene polymorphisms are associated with sarcoidosis in a Han Chinese population: a case–control study
title_full_unstemmed Annexin A11 (ANXA11) gene polymorphisms are associated with sarcoidosis in a Han Chinese population: a case–control study
title_short Annexin A11 (ANXA11) gene polymorphisms are associated with sarcoidosis in a Han Chinese population: a case–control study
title_sort annexin a11 (anxa11) gene polymorphisms are associated with sarcoidosis in a han chinese population: a case–control study
topic Infectious Diseases
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4120255/
https://www.ncbi.nlm.nih.gov/pubmed/25056970
http://dx.doi.org/10.1136/bmjopen-2013-004466
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