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DNA Barcodes and Species Distribution Models Evaluate Threats of Global Climate Changes to Genetic Diversity: A Case Study from Nanorana parkeri (Anura: Dicroglossidae)

Anthropogenic global climate changes are one of the greatest threats to biodiversity. Distribution modeling can predict the effects of climate changes and potentially their effects on genetic diversity. DNA barcoding quickly identifies patterns of genetic diversity. As a case study, we use DNA barco...

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Autores principales: Zhou, Wei-wei, Zhang, Bao-lin, Chen, Hong-man, Jin, Jie-qiong, Yang, Jun-xiao, Wang, Yun-yu, Jiang, Ke, Murphy, Robert W., Zhang, Ya-ping, Che, Jing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4122371/
https://www.ncbi.nlm.nih.gov/pubmed/25093586
http://dx.doi.org/10.1371/journal.pone.0103899
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author Zhou, Wei-wei
Zhang, Bao-lin
Chen, Hong-man
Jin, Jie-qiong
Yang, Jun-xiao
Wang, Yun-yu
Jiang, Ke
Murphy, Robert W.
Zhang, Ya-ping
Che, Jing
author_facet Zhou, Wei-wei
Zhang, Bao-lin
Chen, Hong-man
Jin, Jie-qiong
Yang, Jun-xiao
Wang, Yun-yu
Jiang, Ke
Murphy, Robert W.
Zhang, Ya-ping
Che, Jing
author_sort Zhou, Wei-wei
collection PubMed
description Anthropogenic global climate changes are one of the greatest threats to biodiversity. Distribution modeling can predict the effects of climate changes and potentially their effects on genetic diversity. DNA barcoding quickly identifies patterns of genetic diversity. As a case study, we use DNA barcodes and distribution models to predict threats under climate changes in the frog Nanorana parkeri, which is endemic to the Qinghai-Tibetan Plateau. Barcoding identifies major lineages W and E. Lineage W has a single origin in a refugium and Lineage E derives from three refugia. All refugia locate in river valleys and each greatly contributes to the current level of intraspecific genetic diversity. Species distribution models suggest that global climate changes will greatly influence N. parkeri, especially in the level of genetic diversity, because two former refugia will fail to provide suitable habitat. Our pipeline provides a novel application of DNA barcoding and has important implications for the conservation of biodiversity in southern areas of the Qinghai-Tibetan Plateau.
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spelling pubmed-41223712014-08-12 DNA Barcodes and Species Distribution Models Evaluate Threats of Global Climate Changes to Genetic Diversity: A Case Study from Nanorana parkeri (Anura: Dicroglossidae) Zhou, Wei-wei Zhang, Bao-lin Chen, Hong-man Jin, Jie-qiong Yang, Jun-xiao Wang, Yun-yu Jiang, Ke Murphy, Robert W. Zhang, Ya-ping Che, Jing PLoS One Research Article Anthropogenic global climate changes are one of the greatest threats to biodiversity. Distribution modeling can predict the effects of climate changes and potentially their effects on genetic diversity. DNA barcoding quickly identifies patterns of genetic diversity. As a case study, we use DNA barcodes and distribution models to predict threats under climate changes in the frog Nanorana parkeri, which is endemic to the Qinghai-Tibetan Plateau. Barcoding identifies major lineages W and E. Lineage W has a single origin in a refugium and Lineage E derives from three refugia. All refugia locate in river valleys and each greatly contributes to the current level of intraspecific genetic diversity. Species distribution models suggest that global climate changes will greatly influence N. parkeri, especially in the level of genetic diversity, because two former refugia will fail to provide suitable habitat. Our pipeline provides a novel application of DNA barcoding and has important implications for the conservation of biodiversity in southern areas of the Qinghai-Tibetan Plateau. Public Library of Science 2014-08-05 /pmc/articles/PMC4122371/ /pubmed/25093586 http://dx.doi.org/10.1371/journal.pone.0103899 Text en © 2014 Zhou et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Zhou, Wei-wei
Zhang, Bao-lin
Chen, Hong-man
Jin, Jie-qiong
Yang, Jun-xiao
Wang, Yun-yu
Jiang, Ke
Murphy, Robert W.
Zhang, Ya-ping
Che, Jing
DNA Barcodes and Species Distribution Models Evaluate Threats of Global Climate Changes to Genetic Diversity: A Case Study from Nanorana parkeri (Anura: Dicroglossidae)
title DNA Barcodes and Species Distribution Models Evaluate Threats of Global Climate Changes to Genetic Diversity: A Case Study from Nanorana parkeri (Anura: Dicroglossidae)
title_full DNA Barcodes and Species Distribution Models Evaluate Threats of Global Climate Changes to Genetic Diversity: A Case Study from Nanorana parkeri (Anura: Dicroglossidae)
title_fullStr DNA Barcodes and Species Distribution Models Evaluate Threats of Global Climate Changes to Genetic Diversity: A Case Study from Nanorana parkeri (Anura: Dicroglossidae)
title_full_unstemmed DNA Barcodes and Species Distribution Models Evaluate Threats of Global Climate Changes to Genetic Diversity: A Case Study from Nanorana parkeri (Anura: Dicroglossidae)
title_short DNA Barcodes and Species Distribution Models Evaluate Threats of Global Climate Changes to Genetic Diversity: A Case Study from Nanorana parkeri (Anura: Dicroglossidae)
title_sort dna barcodes and species distribution models evaluate threats of global climate changes to genetic diversity: a case study from nanorana parkeri (anura: dicroglossidae)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4122371/
https://www.ncbi.nlm.nih.gov/pubmed/25093586
http://dx.doi.org/10.1371/journal.pone.0103899
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