Cargando…

The Blood Exposome and Its Role in Discovering Causes of Disease

Background: Since 2001, researchers have examined the human genome (G) mainly to discover causes of disease, despite evidence that G explains relatively little risk. We posit that unexplained disease risks are caused by the exposome (E; representing all exposures) and G × E interactions. Thus, etiol...

Descripción completa

Detalles Bibliográficos
Autores principales: Rappaport, Stephen M., Barupal, Dinesh K., Wishart, David, Vineis, Paolo, Scalbert, Augustin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: NLM-Export 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4123034/
https://www.ncbi.nlm.nih.gov/pubmed/24659601
http://dx.doi.org/10.1289/ehp.1308015
_version_ 1782329442517909504
author Rappaport, Stephen M.
Barupal, Dinesh K.
Wishart, David
Vineis, Paolo
Scalbert, Augustin
author_facet Rappaport, Stephen M.
Barupal, Dinesh K.
Wishart, David
Vineis, Paolo
Scalbert, Augustin
author_sort Rappaport, Stephen M.
collection PubMed
description Background: Since 2001, researchers have examined the human genome (G) mainly to discover causes of disease, despite evidence that G explains relatively little risk. We posit that unexplained disease risks are caused by the exposome (E; representing all exposures) and G × E interactions. Thus, etiologic research has been hampered by scientists’ continuing reliance on low-tech methods to characterize E compared with high-tech omics for characterizing G. Objectives: Because exposures are inherently chemical in nature and arise from both endogenous and exogenous sources, blood specimens can be used to characterize exposomes. To explore the “blood exposome” and its connection to disease, we sought human blood concentrations of many chemicals, along with their sources, evidence of chronic-disease risks, and numbers of metabolic pathways. Methods: From the literature we obtained human blood concentrations of 1,561 small molecules and metals derived from foods, drugs, pollutants, and endogenous processes. We mapped chemical similarities after weighting by blood concentrations, disease-risk citations, and numbers of human metabolic pathways. Results: Blood concentrations spanned 11 orders of magnitude and were indistinguishable for endogenous and food chemicals and drugs, whereas those of pollutants were 1,000 times lower. Chemical similarities mapped by disease risks were equally distributed by source categories, but those mapped by metabolic pathways were dominated by endogenous molecules and essential nutrients. Conclusions: For studies of disease etiology, the complexity of human exposures motivates characterization of the blood exposome, which includes all biologically active chemicals. Because most small molecules in blood are not human metabolites, investigations of causal pathways should expand beyond the endogenous metabolome. Citation: Rappaport SM, Barupal DK, Wishart D, Vineis P, Scalbert A. 2014. The blood exposome and its role in discovering causes of disease. Environ Health Perspect 122:769–774; http://dx.doi.org/10.1289/ehp.1308015
format Online
Article
Text
id pubmed-4123034
institution National Center for Biotechnology Information
language English
publishDate 2014
publisher NLM-Export
record_format MEDLINE/PubMed
spelling pubmed-41230342014-08-11 The Blood Exposome and Its Role in Discovering Causes of Disease Rappaport, Stephen M. Barupal, Dinesh K. Wishart, David Vineis, Paolo Scalbert, Augustin Environ Health Perspect Review Background: Since 2001, researchers have examined the human genome (G) mainly to discover causes of disease, despite evidence that G explains relatively little risk. We posit that unexplained disease risks are caused by the exposome (E; representing all exposures) and G × E interactions. Thus, etiologic research has been hampered by scientists’ continuing reliance on low-tech methods to characterize E compared with high-tech omics for characterizing G. Objectives: Because exposures are inherently chemical in nature and arise from both endogenous and exogenous sources, blood specimens can be used to characterize exposomes. To explore the “blood exposome” and its connection to disease, we sought human blood concentrations of many chemicals, along with their sources, evidence of chronic-disease risks, and numbers of metabolic pathways. Methods: From the literature we obtained human blood concentrations of 1,561 small molecules and metals derived from foods, drugs, pollutants, and endogenous processes. We mapped chemical similarities after weighting by blood concentrations, disease-risk citations, and numbers of human metabolic pathways. Results: Blood concentrations spanned 11 orders of magnitude and were indistinguishable for endogenous and food chemicals and drugs, whereas those of pollutants were 1,000 times lower. Chemical similarities mapped by disease risks were equally distributed by source categories, but those mapped by metabolic pathways were dominated by endogenous molecules and essential nutrients. Conclusions: For studies of disease etiology, the complexity of human exposures motivates characterization of the blood exposome, which includes all biologically active chemicals. Because most small molecules in blood are not human metabolites, investigations of causal pathways should expand beyond the endogenous metabolome. Citation: Rappaport SM, Barupal DK, Wishart D, Vineis P, Scalbert A. 2014. The blood exposome and its role in discovering causes of disease. Environ Health Perspect 122:769–774; http://dx.doi.org/10.1289/ehp.1308015 NLM-Export 2014-03-21 2014-08 /pmc/articles/PMC4123034/ /pubmed/24659601 http://dx.doi.org/10.1289/ehp.1308015 Text en http://creativecommons.org/publicdomain/mark/1.0/ Publication of EHP lies in the public domain and is therefore without copyright. All text from EHP may be reprinted freely. Use of materials published in EHP should be acknowledged (for example, “Reproduced with permission from Environmental Health Perspectives”); pertinent reference information should be provided for the article from which the material was reproduced. Articles from EHP, especially the News section, may contain photographs or illustrations copyrighted by other commercial organizations or individuals that may not be used without obtaining prior approval from the holder of the copyright.
spellingShingle Review
Rappaport, Stephen M.
Barupal, Dinesh K.
Wishart, David
Vineis, Paolo
Scalbert, Augustin
The Blood Exposome and Its Role in Discovering Causes of Disease
title The Blood Exposome and Its Role in Discovering Causes of Disease
title_full The Blood Exposome and Its Role in Discovering Causes of Disease
title_fullStr The Blood Exposome and Its Role in Discovering Causes of Disease
title_full_unstemmed The Blood Exposome and Its Role in Discovering Causes of Disease
title_short The Blood Exposome and Its Role in Discovering Causes of Disease
title_sort blood exposome and its role in discovering causes of disease
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4123034/
https://www.ncbi.nlm.nih.gov/pubmed/24659601
http://dx.doi.org/10.1289/ehp.1308015
work_keys_str_mv AT rappaportstephenm thebloodexposomeanditsroleindiscoveringcausesofdisease
AT barupaldineshk thebloodexposomeanditsroleindiscoveringcausesofdisease
AT wishartdavid thebloodexposomeanditsroleindiscoveringcausesofdisease
AT vineispaolo thebloodexposomeanditsroleindiscoveringcausesofdisease
AT scalbertaugustin thebloodexposomeanditsroleindiscoveringcausesofdisease
AT rappaportstephenm bloodexposomeanditsroleindiscoveringcausesofdisease
AT barupaldineshk bloodexposomeanditsroleindiscoveringcausesofdisease
AT wishartdavid bloodexposomeanditsroleindiscoveringcausesofdisease
AT vineispaolo bloodexposomeanditsroleindiscoveringcausesofdisease
AT scalbertaugustin bloodexposomeanditsroleindiscoveringcausesofdisease