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The Blood Exposome and Its Role in Discovering Causes of Disease
Background: Since 2001, researchers have examined the human genome (G) mainly to discover causes of disease, despite evidence that G explains relatively little risk. We posit that unexplained disease risks are caused by the exposome (E; representing all exposures) and G × E interactions. Thus, etiol...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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NLM-Export
2014
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4123034/ https://www.ncbi.nlm.nih.gov/pubmed/24659601 http://dx.doi.org/10.1289/ehp.1308015 |
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author | Rappaport, Stephen M. Barupal, Dinesh K. Wishart, David Vineis, Paolo Scalbert, Augustin |
author_facet | Rappaport, Stephen M. Barupal, Dinesh K. Wishart, David Vineis, Paolo Scalbert, Augustin |
author_sort | Rappaport, Stephen M. |
collection | PubMed |
description | Background: Since 2001, researchers have examined the human genome (G) mainly to discover causes of disease, despite evidence that G explains relatively little risk. We posit that unexplained disease risks are caused by the exposome (E; representing all exposures) and G × E interactions. Thus, etiologic research has been hampered by scientists’ continuing reliance on low-tech methods to characterize E compared with high-tech omics for characterizing G. Objectives: Because exposures are inherently chemical in nature and arise from both endogenous and exogenous sources, blood specimens can be used to characterize exposomes. To explore the “blood exposome” and its connection to disease, we sought human blood concentrations of many chemicals, along with their sources, evidence of chronic-disease risks, and numbers of metabolic pathways. Methods: From the literature we obtained human blood concentrations of 1,561 small molecules and metals derived from foods, drugs, pollutants, and endogenous processes. We mapped chemical similarities after weighting by blood concentrations, disease-risk citations, and numbers of human metabolic pathways. Results: Blood concentrations spanned 11 orders of magnitude and were indistinguishable for endogenous and food chemicals and drugs, whereas those of pollutants were 1,000 times lower. Chemical similarities mapped by disease risks were equally distributed by source categories, but those mapped by metabolic pathways were dominated by endogenous molecules and essential nutrients. Conclusions: For studies of disease etiology, the complexity of human exposures motivates characterization of the blood exposome, which includes all biologically active chemicals. Because most small molecules in blood are not human metabolites, investigations of causal pathways should expand beyond the endogenous metabolome. Citation: Rappaport SM, Barupal DK, Wishart D, Vineis P, Scalbert A. 2014. The blood exposome and its role in discovering causes of disease. Environ Health Perspect 122:769–774; http://dx.doi.org/10.1289/ehp.1308015 |
format | Online Article Text |
id | pubmed-4123034 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | NLM-Export |
record_format | MEDLINE/PubMed |
spelling | pubmed-41230342014-08-11 The Blood Exposome and Its Role in Discovering Causes of Disease Rappaport, Stephen M. Barupal, Dinesh K. Wishart, David Vineis, Paolo Scalbert, Augustin Environ Health Perspect Review Background: Since 2001, researchers have examined the human genome (G) mainly to discover causes of disease, despite evidence that G explains relatively little risk. We posit that unexplained disease risks are caused by the exposome (E; representing all exposures) and G × E interactions. Thus, etiologic research has been hampered by scientists’ continuing reliance on low-tech methods to characterize E compared with high-tech omics for characterizing G. Objectives: Because exposures are inherently chemical in nature and arise from both endogenous and exogenous sources, blood specimens can be used to characterize exposomes. To explore the “blood exposome” and its connection to disease, we sought human blood concentrations of many chemicals, along with their sources, evidence of chronic-disease risks, and numbers of metabolic pathways. Methods: From the literature we obtained human blood concentrations of 1,561 small molecules and metals derived from foods, drugs, pollutants, and endogenous processes. We mapped chemical similarities after weighting by blood concentrations, disease-risk citations, and numbers of human metabolic pathways. Results: Blood concentrations spanned 11 orders of magnitude and were indistinguishable for endogenous and food chemicals and drugs, whereas those of pollutants were 1,000 times lower. Chemical similarities mapped by disease risks were equally distributed by source categories, but those mapped by metabolic pathways were dominated by endogenous molecules and essential nutrients. Conclusions: For studies of disease etiology, the complexity of human exposures motivates characterization of the blood exposome, which includes all biologically active chemicals. Because most small molecules in blood are not human metabolites, investigations of causal pathways should expand beyond the endogenous metabolome. Citation: Rappaport SM, Barupal DK, Wishart D, Vineis P, Scalbert A. 2014. The blood exposome and its role in discovering causes of disease. Environ Health Perspect 122:769–774; http://dx.doi.org/10.1289/ehp.1308015 NLM-Export 2014-03-21 2014-08 /pmc/articles/PMC4123034/ /pubmed/24659601 http://dx.doi.org/10.1289/ehp.1308015 Text en http://creativecommons.org/publicdomain/mark/1.0/ Publication of EHP lies in the public domain and is therefore without copyright. All text from EHP may be reprinted freely. Use of materials published in EHP should be acknowledged (for example, “Reproduced with permission from Environmental Health Perspectives”); pertinent reference information should be provided for the article from which the material was reproduced. Articles from EHP, especially the News section, may contain photographs or illustrations copyrighted by other commercial organizations or individuals that may not be used without obtaining prior approval from the holder of the copyright. |
spellingShingle | Review Rappaport, Stephen M. Barupal, Dinesh K. Wishart, David Vineis, Paolo Scalbert, Augustin The Blood Exposome and Its Role in Discovering Causes of Disease |
title | The Blood Exposome and Its Role in Discovering Causes of Disease |
title_full | The Blood Exposome and Its Role in Discovering Causes of Disease |
title_fullStr | The Blood Exposome and Its Role in Discovering Causes of Disease |
title_full_unstemmed | The Blood Exposome and Its Role in Discovering Causes of Disease |
title_short | The Blood Exposome and Its Role in Discovering Causes of Disease |
title_sort | blood exposome and its role in discovering causes of disease |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4123034/ https://www.ncbi.nlm.nih.gov/pubmed/24659601 http://dx.doi.org/10.1289/ehp.1308015 |
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