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Robust quantification of orientation selectivity and direction selectivity
Neurons in the visual cortex of all examined mammals exhibit orientation or direction tuning. New imaging techniques are allowing the circuit mechanisms underlying orientation and direction selectivity to be studied with clarity that was not possible a decade ago. However, these new techniques bring...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4123790/ https://www.ncbi.nlm.nih.gov/pubmed/25147504 http://dx.doi.org/10.3389/fncir.2014.00092 |
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author | Mazurek, Mark Kager, Marisa Van Hooser, Stephen D. |
author_facet | Mazurek, Mark Kager, Marisa Van Hooser, Stephen D. |
author_sort | Mazurek, Mark |
collection | PubMed |
description | Neurons in the visual cortex of all examined mammals exhibit orientation or direction tuning. New imaging techniques are allowing the circuit mechanisms underlying orientation and direction selectivity to be studied with clarity that was not possible a decade ago. However, these new techniques bring new challenges: robust quantitative measurements are needed to evaluate the findings from these studies, which can involve thousands of cells of varying response strength. Here we show that traditional measures of selectivity such as the orientation index (OI) and direction index (DI) are poorly suited for quantitative evaluation of orientation and direction tuning. We explore several alternative methods for quantifying tuning and for addressing a variety of questions that arise in studies on orientation- and direction-tuned cells and cell populations. We provide recommendations for which methods are best suited to which applications and we offer tips for avoiding potential pitfalls in applying these methods. Our goal is to supply a solid quantitative foundation for studies involving orientation and direction tuning. |
format | Online Article Text |
id | pubmed-4123790 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-41237902014-08-21 Robust quantification of orientation selectivity and direction selectivity Mazurek, Mark Kager, Marisa Van Hooser, Stephen D. Front Neural Circuits Neuroscience Neurons in the visual cortex of all examined mammals exhibit orientation or direction tuning. New imaging techniques are allowing the circuit mechanisms underlying orientation and direction selectivity to be studied with clarity that was not possible a decade ago. However, these new techniques bring new challenges: robust quantitative measurements are needed to evaluate the findings from these studies, which can involve thousands of cells of varying response strength. Here we show that traditional measures of selectivity such as the orientation index (OI) and direction index (DI) are poorly suited for quantitative evaluation of orientation and direction tuning. We explore several alternative methods for quantifying tuning and for addressing a variety of questions that arise in studies on orientation- and direction-tuned cells and cell populations. We provide recommendations for which methods are best suited to which applications and we offer tips for avoiding potential pitfalls in applying these methods. Our goal is to supply a solid quantitative foundation for studies involving orientation and direction tuning. Frontiers Media S.A. 2014-08-06 /pmc/articles/PMC4123790/ /pubmed/25147504 http://dx.doi.org/10.3389/fncir.2014.00092 Text en Copyright © 2014 Mazurek, Kager and Van Hooser. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Mazurek, Mark Kager, Marisa Van Hooser, Stephen D. Robust quantification of orientation selectivity and direction selectivity |
title | Robust quantification of orientation selectivity and direction selectivity |
title_full | Robust quantification of orientation selectivity and direction selectivity |
title_fullStr | Robust quantification of orientation selectivity and direction selectivity |
title_full_unstemmed | Robust quantification of orientation selectivity and direction selectivity |
title_short | Robust quantification of orientation selectivity and direction selectivity |
title_sort | robust quantification of orientation selectivity and direction selectivity |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4123790/ https://www.ncbi.nlm.nih.gov/pubmed/25147504 http://dx.doi.org/10.3389/fncir.2014.00092 |
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