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Fixation of CO(2) in Clostridium cellulovorans analyzed by (13)C-isotopomer-based target metabolomics
Clostridium cellulovorans has been one of promising microorganisms to use biomass efficiently; however the basic metabolic pathways have not been completely known. We carried out (13)C-isotopomer-based target metabolome analysis, or carbohydrate conversion process analysis, for more profound underst...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4124662/ https://www.ncbi.nlm.nih.gov/pubmed/24103325 http://dx.doi.org/10.1186/2191-0855-3-61 |
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author | Shinohara, Masahiro Sakuragi, Hiroshi Morisaka, Hironobu Miyake, Hideo Tamaru, Yutaka Fukusaki, Eiichiro Kuroda, Kouichi Ueda, Mitsuyoshi |
author_facet | Shinohara, Masahiro Sakuragi, Hiroshi Morisaka, Hironobu Miyake, Hideo Tamaru, Yutaka Fukusaki, Eiichiro Kuroda, Kouichi Ueda, Mitsuyoshi |
author_sort | Shinohara, Masahiro |
collection | PubMed |
description | Clostridium cellulovorans has been one of promising microorganisms to use biomass efficiently; however the basic metabolic pathways have not been completely known. We carried out (13)C-isotopomer-based target metabolome analysis, or carbohydrate conversion process analysis, for more profound understanding of metabolic pathways of the bacterium. Our findings that pyruvate + oxaloacetate, fumarate, and malate inside and outside cells exhibited (13)C incorporation suggest that C. cellulovorans exactly fixed CO(2) and partly operated the TCA cycle in a reductive manner. Accompanied with CO(2) fixation, the microorganism was also found to produce and secrete lactate. Overall, our study demonstrates that a part of C. cellulovorans metabolic pathways related to glycolysis and the TCA cycle are involved in CO(2) fixation. |
format | Online Article Text |
id | pubmed-4124662 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Springer |
record_format | MEDLINE/PubMed |
spelling | pubmed-41246622014-08-11 Fixation of CO(2) in Clostridium cellulovorans analyzed by (13)C-isotopomer-based target metabolomics Shinohara, Masahiro Sakuragi, Hiroshi Morisaka, Hironobu Miyake, Hideo Tamaru, Yutaka Fukusaki, Eiichiro Kuroda, Kouichi Ueda, Mitsuyoshi AMB Express Original Article Clostridium cellulovorans has been one of promising microorganisms to use biomass efficiently; however the basic metabolic pathways have not been completely known. We carried out (13)C-isotopomer-based target metabolome analysis, or carbohydrate conversion process analysis, for more profound understanding of metabolic pathways of the bacterium. Our findings that pyruvate + oxaloacetate, fumarate, and malate inside and outside cells exhibited (13)C incorporation suggest that C. cellulovorans exactly fixed CO(2) and partly operated the TCA cycle in a reductive manner. Accompanied with CO(2) fixation, the microorganism was also found to produce and secrete lactate. Overall, our study demonstrates that a part of C. cellulovorans metabolic pathways related to glycolysis and the TCA cycle are involved in CO(2) fixation. Springer 2013-10-09 /pmc/articles/PMC4124662/ /pubmed/24103325 http://dx.doi.org/10.1186/2191-0855-3-61 Text en Copyright © 2013 Shinohara et al.; licensee Springer. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Shinohara, Masahiro Sakuragi, Hiroshi Morisaka, Hironobu Miyake, Hideo Tamaru, Yutaka Fukusaki, Eiichiro Kuroda, Kouichi Ueda, Mitsuyoshi Fixation of CO(2) in Clostridium cellulovorans analyzed by (13)C-isotopomer-based target metabolomics |
title | Fixation of CO(2) in Clostridium cellulovorans analyzed by (13)C-isotopomer-based target metabolomics |
title_full | Fixation of CO(2) in Clostridium cellulovorans analyzed by (13)C-isotopomer-based target metabolomics |
title_fullStr | Fixation of CO(2) in Clostridium cellulovorans analyzed by (13)C-isotopomer-based target metabolomics |
title_full_unstemmed | Fixation of CO(2) in Clostridium cellulovorans analyzed by (13)C-isotopomer-based target metabolomics |
title_short | Fixation of CO(2) in Clostridium cellulovorans analyzed by (13)C-isotopomer-based target metabolomics |
title_sort | fixation of co(2) in clostridium cellulovorans analyzed by (13)c-isotopomer-based target metabolomics |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4124662/ https://www.ncbi.nlm.nih.gov/pubmed/24103325 http://dx.doi.org/10.1186/2191-0855-3-61 |
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