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Fixation of CO(2) in Clostridium cellulovorans analyzed by (13)C-isotopomer-based target metabolomics

Clostridium cellulovorans has been one of promising microorganisms to use biomass efficiently; however the basic metabolic pathways have not been completely known. We carried out (13)C-isotopomer-based target metabolome analysis, or carbohydrate conversion process analysis, for more profound underst...

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Autores principales: Shinohara, Masahiro, Sakuragi, Hiroshi, Morisaka, Hironobu, Miyake, Hideo, Tamaru, Yutaka, Fukusaki, Eiichiro, Kuroda, Kouichi, Ueda, Mitsuyoshi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4124662/
https://www.ncbi.nlm.nih.gov/pubmed/24103325
http://dx.doi.org/10.1186/2191-0855-3-61
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author Shinohara, Masahiro
Sakuragi, Hiroshi
Morisaka, Hironobu
Miyake, Hideo
Tamaru, Yutaka
Fukusaki, Eiichiro
Kuroda, Kouichi
Ueda, Mitsuyoshi
author_facet Shinohara, Masahiro
Sakuragi, Hiroshi
Morisaka, Hironobu
Miyake, Hideo
Tamaru, Yutaka
Fukusaki, Eiichiro
Kuroda, Kouichi
Ueda, Mitsuyoshi
author_sort Shinohara, Masahiro
collection PubMed
description Clostridium cellulovorans has been one of promising microorganisms to use biomass efficiently; however the basic metabolic pathways have not been completely known. We carried out (13)C-isotopomer-based target metabolome analysis, or carbohydrate conversion process analysis, for more profound understanding of metabolic pathways of the bacterium. Our findings that pyruvate + oxaloacetate, fumarate, and malate inside and outside cells exhibited (13)C incorporation suggest that C. cellulovorans exactly fixed CO(2) and partly operated the TCA cycle in a reductive manner. Accompanied with CO(2) fixation, the microorganism was also found to produce and secrete lactate. Overall, our study demonstrates that a part of C. cellulovorans metabolic pathways related to glycolysis and the TCA cycle are involved in CO(2) fixation.
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spelling pubmed-41246622014-08-11 Fixation of CO(2) in Clostridium cellulovorans analyzed by (13)C-isotopomer-based target metabolomics Shinohara, Masahiro Sakuragi, Hiroshi Morisaka, Hironobu Miyake, Hideo Tamaru, Yutaka Fukusaki, Eiichiro Kuroda, Kouichi Ueda, Mitsuyoshi AMB Express Original Article Clostridium cellulovorans has been one of promising microorganisms to use biomass efficiently; however the basic metabolic pathways have not been completely known. We carried out (13)C-isotopomer-based target metabolome analysis, or carbohydrate conversion process analysis, for more profound understanding of metabolic pathways of the bacterium. Our findings that pyruvate + oxaloacetate, fumarate, and malate inside and outside cells exhibited (13)C incorporation suggest that C. cellulovorans exactly fixed CO(2) and partly operated the TCA cycle in a reductive manner. Accompanied with CO(2) fixation, the microorganism was also found to produce and secrete lactate. Overall, our study demonstrates that a part of C. cellulovorans metabolic pathways related to glycolysis and the TCA cycle are involved in CO(2) fixation. Springer 2013-10-09 /pmc/articles/PMC4124662/ /pubmed/24103325 http://dx.doi.org/10.1186/2191-0855-3-61 Text en Copyright © 2013 Shinohara et al.; licensee Springer. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Shinohara, Masahiro
Sakuragi, Hiroshi
Morisaka, Hironobu
Miyake, Hideo
Tamaru, Yutaka
Fukusaki, Eiichiro
Kuroda, Kouichi
Ueda, Mitsuyoshi
Fixation of CO(2) in Clostridium cellulovorans analyzed by (13)C-isotopomer-based target metabolomics
title Fixation of CO(2) in Clostridium cellulovorans analyzed by (13)C-isotopomer-based target metabolomics
title_full Fixation of CO(2) in Clostridium cellulovorans analyzed by (13)C-isotopomer-based target metabolomics
title_fullStr Fixation of CO(2) in Clostridium cellulovorans analyzed by (13)C-isotopomer-based target metabolomics
title_full_unstemmed Fixation of CO(2) in Clostridium cellulovorans analyzed by (13)C-isotopomer-based target metabolomics
title_short Fixation of CO(2) in Clostridium cellulovorans analyzed by (13)C-isotopomer-based target metabolomics
title_sort fixation of co(2) in clostridium cellulovorans analyzed by (13)c-isotopomer-based target metabolomics
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4124662/
https://www.ncbi.nlm.nih.gov/pubmed/24103325
http://dx.doi.org/10.1186/2191-0855-3-61
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