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Snow Surface Microbiome on the High Antarctic Plateau (DOME C)

The cryosphere is an integral part of the global climate system and one of the major habitable ecosystems of Earth's biosphere. These permanently frozen environments harbor diverse, viable and metabolically active microbial populations that represent almost all the major phylogenetic groups. In...

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Autores principales: Michaud, Luigi, Lo Giudice, Angelina, Mysara, Mohamed, Monsieurs, Pieter, Raffa, Carmela, Leys, Natalie, Amalfitano, Stefano, Van Houdt, Rob
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4125213/
https://www.ncbi.nlm.nih.gov/pubmed/25101779
http://dx.doi.org/10.1371/journal.pone.0104505
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author Michaud, Luigi
Lo Giudice, Angelina
Mysara, Mohamed
Monsieurs, Pieter
Raffa, Carmela
Leys, Natalie
Amalfitano, Stefano
Van Houdt, Rob
author_facet Michaud, Luigi
Lo Giudice, Angelina
Mysara, Mohamed
Monsieurs, Pieter
Raffa, Carmela
Leys, Natalie
Amalfitano, Stefano
Van Houdt, Rob
author_sort Michaud, Luigi
collection PubMed
description The cryosphere is an integral part of the global climate system and one of the major habitable ecosystems of Earth's biosphere. These permanently frozen environments harbor diverse, viable and metabolically active microbial populations that represent almost all the major phylogenetic groups. In this study, we investigated the microbial diversity in the surface snow surrounding the Concordia Research Station on the High Antarctic Plateau through a polyphasic approach, including direct prokaryotic quantification by flow cytometry and catalyzed reporter deposition fluorescence in situ hybridization (CARD-FISH), and phylogenetic identification by 16S RNA gene clone library sequencing and 454 16S amplicon pyrosequencing. Although the microbial abundance was low (<10(3) cells/ml of snowmelt), concordant results were obtained with the different techniques. The microbial community was mainly composed of members of the Alpha-proteobacteria class (e.g. Kiloniellaceae and Rhodobacteraceae), which is one of the most well-represented bacterial groups in marine habitats, Bacteroidetes (e.g. Cryomorphaceae and Flavobacteriaceae) and Cyanobacteria. Based on our results, polar microorganisms could not only be considered as deposited airborne particles, but as an active component of the snowpack ecology of the High Antarctic Plateau.
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spelling pubmed-41252132014-08-12 Snow Surface Microbiome on the High Antarctic Plateau (DOME C) Michaud, Luigi Lo Giudice, Angelina Mysara, Mohamed Monsieurs, Pieter Raffa, Carmela Leys, Natalie Amalfitano, Stefano Van Houdt, Rob PLoS One Research Article The cryosphere is an integral part of the global climate system and one of the major habitable ecosystems of Earth's biosphere. These permanently frozen environments harbor diverse, viable and metabolically active microbial populations that represent almost all the major phylogenetic groups. In this study, we investigated the microbial diversity in the surface snow surrounding the Concordia Research Station on the High Antarctic Plateau through a polyphasic approach, including direct prokaryotic quantification by flow cytometry and catalyzed reporter deposition fluorescence in situ hybridization (CARD-FISH), and phylogenetic identification by 16S RNA gene clone library sequencing and 454 16S amplicon pyrosequencing. Although the microbial abundance was low (<10(3) cells/ml of snowmelt), concordant results were obtained with the different techniques. The microbial community was mainly composed of members of the Alpha-proteobacteria class (e.g. Kiloniellaceae and Rhodobacteraceae), which is one of the most well-represented bacterial groups in marine habitats, Bacteroidetes (e.g. Cryomorphaceae and Flavobacteriaceae) and Cyanobacteria. Based on our results, polar microorganisms could not only be considered as deposited airborne particles, but as an active component of the snowpack ecology of the High Antarctic Plateau. Public Library of Science 2014-08-07 /pmc/articles/PMC4125213/ /pubmed/25101779 http://dx.doi.org/10.1371/journal.pone.0104505 Text en © 2014 Michaud et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Michaud, Luigi
Lo Giudice, Angelina
Mysara, Mohamed
Monsieurs, Pieter
Raffa, Carmela
Leys, Natalie
Amalfitano, Stefano
Van Houdt, Rob
Snow Surface Microbiome on the High Antarctic Plateau (DOME C)
title Snow Surface Microbiome on the High Antarctic Plateau (DOME C)
title_full Snow Surface Microbiome on the High Antarctic Plateau (DOME C)
title_fullStr Snow Surface Microbiome on the High Antarctic Plateau (DOME C)
title_full_unstemmed Snow Surface Microbiome on the High Antarctic Plateau (DOME C)
title_short Snow Surface Microbiome on the High Antarctic Plateau (DOME C)
title_sort snow surface microbiome on the high antarctic plateau (dome c)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4125213/
https://www.ncbi.nlm.nih.gov/pubmed/25101779
http://dx.doi.org/10.1371/journal.pone.0104505
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