Cargando…

Do Rumen Bacteroidetes Utilize an Alternative Mechanism for Cellulose Degradation?

Uncultured and therefore uncharacterized Bacteroidetes lineages are ubiquitous in many natural ecosystems which specialize in lignocellulose degradation. However, their metabolic contribution remains mysterious, as well-studied cultured Bacteroidetes have been shown to degrade only soluble polysacch...

Descripción completa

Detalles Bibliográficos
Autores principales: Naas, A. E., Mackenzie, A. K., Mravec, J., Schückel, J., Willats, W. G. T., Eijsink, V. G. H., Pope, P. B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society of Microbiology 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4128358/
https://www.ncbi.nlm.nih.gov/pubmed/25096880
http://dx.doi.org/10.1128/mBio.01401-14
_version_ 1782330118542196736
author Naas, A. E.
Mackenzie, A. K.
Mravec, J.
Schückel, J.
Willats, W. G. T.
Eijsink, V. G. H.
Pope, P. B.
author_facet Naas, A. E.
Mackenzie, A. K.
Mravec, J.
Schückel, J.
Willats, W. G. T.
Eijsink, V. G. H.
Pope, P. B.
author_sort Naas, A. E.
collection PubMed
description Uncultured and therefore uncharacterized Bacteroidetes lineages are ubiquitous in many natural ecosystems which specialize in lignocellulose degradation. However, their metabolic contribution remains mysterious, as well-studied cultured Bacteroidetes have been shown to degrade only soluble polysaccharides within the human distal gut and herbivore rumen. We have interrogated a reconstructed genome from an uncultured Bacteroidetes phylotype that dominates a switchgrass-associated community within the cow rumen. Importantly, this characterization effort has revealed the first preliminary evidence for polysaccharide utilization locus (PUL)-catalyzed conversion of cellulose. Based on these findings, we propose a further expansion of the PUL paradigm and the saccharolytic capacity of rumen Bacteroidetes species to include cellulose, the most abundant terrestrial polysaccharide on Earth. Moreover, the perspective of a cellulolytic PUL lays the foundation for PULs to be considered an alternative mechanism for cellulose degradation, next to cellulosomes and free-enzyme systems.
format Online
Article
Text
id pubmed-4128358
institution National Center for Biotechnology Information
language English
publishDate 2014
publisher American Society of Microbiology
record_format MEDLINE/PubMed
spelling pubmed-41283582014-08-12 Do Rumen Bacteroidetes Utilize an Alternative Mechanism for Cellulose Degradation? Naas, A. E. Mackenzie, A. K. Mravec, J. Schückel, J. Willats, W. G. T. Eijsink, V. G. H. Pope, P. B. mBio Opinion/Hypothesis Uncultured and therefore uncharacterized Bacteroidetes lineages are ubiquitous in many natural ecosystems which specialize in lignocellulose degradation. However, their metabolic contribution remains mysterious, as well-studied cultured Bacteroidetes have been shown to degrade only soluble polysaccharides within the human distal gut and herbivore rumen. We have interrogated a reconstructed genome from an uncultured Bacteroidetes phylotype that dominates a switchgrass-associated community within the cow rumen. Importantly, this characterization effort has revealed the first preliminary evidence for polysaccharide utilization locus (PUL)-catalyzed conversion of cellulose. Based on these findings, we propose a further expansion of the PUL paradigm and the saccharolytic capacity of rumen Bacteroidetes species to include cellulose, the most abundant terrestrial polysaccharide on Earth. Moreover, the perspective of a cellulolytic PUL lays the foundation for PULs to be considered an alternative mechanism for cellulose degradation, next to cellulosomes and free-enzyme systems. American Society of Microbiology 2014-08-05 /pmc/articles/PMC4128358/ /pubmed/25096880 http://dx.doi.org/10.1128/mBio.01401-14 Text en Copyright © 2014 Naas et al. http://creativecommons.org/licenses/by-nc-sa/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution-Noncommercial-ShareAlike 3.0 Unported license (http://creativecommons.org/licenses/by-nc-sa/3.0/) , which permits unrestricted noncommercial use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Opinion/Hypothesis
Naas, A. E.
Mackenzie, A. K.
Mravec, J.
Schückel, J.
Willats, W. G. T.
Eijsink, V. G. H.
Pope, P. B.
Do Rumen Bacteroidetes Utilize an Alternative Mechanism for Cellulose Degradation?
title Do Rumen Bacteroidetes Utilize an Alternative Mechanism for Cellulose Degradation?
title_full Do Rumen Bacteroidetes Utilize an Alternative Mechanism for Cellulose Degradation?
title_fullStr Do Rumen Bacteroidetes Utilize an Alternative Mechanism for Cellulose Degradation?
title_full_unstemmed Do Rumen Bacteroidetes Utilize an Alternative Mechanism for Cellulose Degradation?
title_short Do Rumen Bacteroidetes Utilize an Alternative Mechanism for Cellulose Degradation?
title_sort do rumen bacteroidetes utilize an alternative mechanism for cellulose degradation?
topic Opinion/Hypothesis
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4128358/
https://www.ncbi.nlm.nih.gov/pubmed/25096880
http://dx.doi.org/10.1128/mBio.01401-14
work_keys_str_mv AT naasae dorumenbacteroidetesutilizeanalternativemechanismforcellulosedegradation
AT mackenzieak dorumenbacteroidetesutilizeanalternativemechanismforcellulosedegradation
AT mravecj dorumenbacteroidetesutilizeanalternativemechanismforcellulosedegradation
AT schuckelj dorumenbacteroidetesutilizeanalternativemechanismforcellulosedegradation
AT willatswgt dorumenbacteroidetesutilizeanalternativemechanismforcellulosedegradation
AT eijsinkvgh dorumenbacteroidetesutilizeanalternativemechanismforcellulosedegradation
AT popepb dorumenbacteroidetesutilizeanalternativemechanismforcellulosedegradation