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Association of a Polymorphism in the BIRC6 Gene with Pseudoexfoliative Glaucoma
Recently an association was observed between alleles in genes of the unfolded protein response pathway and primary open angle glaucoma (POAG). The goal of the current study is to investigate the role of these two genes, protein disulphide isomerase A member 5 (PDIA5) and baculoviral IAP repeat conta...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4132048/ https://www.ncbi.nlm.nih.gov/pubmed/25118708 http://dx.doi.org/10.1371/journal.pone.0105023 |
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author | Ayub, Humaira Micheal, Shazia Akhtar, Farah Khan, Muhammad Imran Bashir, Shaheena Waheed, Nadia K. Ali, Mahmood Schoenmaker-Koller, Frederieke E. Shafique, Sobia Qamar, Raheel den Hollander, Anneke I. |
author_facet | Ayub, Humaira Micheal, Shazia Akhtar, Farah Khan, Muhammad Imran Bashir, Shaheena Waheed, Nadia K. Ali, Mahmood Schoenmaker-Koller, Frederieke E. Shafique, Sobia Qamar, Raheel den Hollander, Anneke I. |
author_sort | Ayub, Humaira |
collection | PubMed |
description | Recently an association was observed between alleles in genes of the unfolded protein response pathway and primary open angle glaucoma (POAG). The goal of the current study is to investigate the role of these two genes, protein disulphide isomerase A member 5 (PDIA5) and baculoviral IAP repeat containing 6 (BIRC6), in different forms of glaucoma. 278 patients with POAG, 132 patients with primary angle closure glaucoma (PACG) and 135 patients with pseudoexfoliative glaucoma (PEXG) were genotyped for single nucleotide polymorphisms (SNPs) rs11720822 in PDIA5 and 471 POAG, 184 PACG and 218 PEXG patients were genotyped for rs2754511 in BIRC6. Genotyping was done by allelic discrimination PCR, and genotype and allele frequencies were calculated. Logistic regression analyses were performed using R software to determine the association of these SNPs with glaucoma. The allele and genotype frequencies of rs11720822 in PDIA5 were not associated with POAG, PACG or PEXG. The TT genotype of rs2754511 in BIRC6 was found to be protective for PEXG (p = 0.05, OR 0.42 [0.22–0.81]) in the Pakistani population, but not for POAG or PACG. This study did not confirm a previously reported association of risk alleles in PDIA5 and BIRC6 with POAG, but did demonstrate a protective role of the T allele of rs2754511 in the BIRC6 gene in PEXG. This supports a role for the unfolded protein response pathway and regulation of apoptotic cell death in the pathogenesis of PEXG. |
format | Online Article Text |
id | pubmed-4132048 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-41320482014-08-19 Association of a Polymorphism in the BIRC6 Gene with Pseudoexfoliative Glaucoma Ayub, Humaira Micheal, Shazia Akhtar, Farah Khan, Muhammad Imran Bashir, Shaheena Waheed, Nadia K. Ali, Mahmood Schoenmaker-Koller, Frederieke E. Shafique, Sobia Qamar, Raheel den Hollander, Anneke I. PLoS One Research Article Recently an association was observed between alleles in genes of the unfolded protein response pathway and primary open angle glaucoma (POAG). The goal of the current study is to investigate the role of these two genes, protein disulphide isomerase A member 5 (PDIA5) and baculoviral IAP repeat containing 6 (BIRC6), in different forms of glaucoma. 278 patients with POAG, 132 patients with primary angle closure glaucoma (PACG) and 135 patients with pseudoexfoliative glaucoma (PEXG) were genotyped for single nucleotide polymorphisms (SNPs) rs11720822 in PDIA5 and 471 POAG, 184 PACG and 218 PEXG patients were genotyped for rs2754511 in BIRC6. Genotyping was done by allelic discrimination PCR, and genotype and allele frequencies were calculated. Logistic regression analyses were performed using R software to determine the association of these SNPs with glaucoma. The allele and genotype frequencies of rs11720822 in PDIA5 were not associated with POAG, PACG or PEXG. The TT genotype of rs2754511 in BIRC6 was found to be protective for PEXG (p = 0.05, OR 0.42 [0.22–0.81]) in the Pakistani population, but not for POAG or PACG. This study did not confirm a previously reported association of risk alleles in PDIA5 and BIRC6 with POAG, but did demonstrate a protective role of the T allele of rs2754511 in the BIRC6 gene in PEXG. This supports a role for the unfolded protein response pathway and regulation of apoptotic cell death in the pathogenesis of PEXG. Public Library of Science 2014-08-13 /pmc/articles/PMC4132048/ /pubmed/25118708 http://dx.doi.org/10.1371/journal.pone.0105023 Text en © 2014 Ayub et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Ayub, Humaira Micheal, Shazia Akhtar, Farah Khan, Muhammad Imran Bashir, Shaheena Waheed, Nadia K. Ali, Mahmood Schoenmaker-Koller, Frederieke E. Shafique, Sobia Qamar, Raheel den Hollander, Anneke I. Association of a Polymorphism in the BIRC6 Gene with Pseudoexfoliative Glaucoma |
title | Association of a Polymorphism in the BIRC6 Gene with Pseudoexfoliative Glaucoma |
title_full | Association of a Polymorphism in the BIRC6 Gene with Pseudoexfoliative Glaucoma |
title_fullStr | Association of a Polymorphism in the BIRC6 Gene with Pseudoexfoliative Glaucoma |
title_full_unstemmed | Association of a Polymorphism in the BIRC6 Gene with Pseudoexfoliative Glaucoma |
title_short | Association of a Polymorphism in the BIRC6 Gene with Pseudoexfoliative Glaucoma |
title_sort | association of a polymorphism in the birc6 gene with pseudoexfoliative glaucoma |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4132048/ https://www.ncbi.nlm.nih.gov/pubmed/25118708 http://dx.doi.org/10.1371/journal.pone.0105023 |
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