Cargando…
VNTRseek—a computational tool to detect tandem repeat variants in high-throughput sequencing data
DNA tandem repeats (TRs) are ubiquitous genomic features which consist of two or more adjacent copies of an underlying pattern sequence. The copies may be identical or approximate. Variable number of tandem repeats or VNTRs are polymorphic TR loci in which the number of pattern copies is variable. I...
Autores principales: | Gelfand, Yevgeniy, Hernandez, Yozen, Loving, Joshua, Benson, Gary |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2014
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4132751/ https://www.ncbi.nlm.nih.gov/pubmed/25056320 http://dx.doi.org/10.1093/nar/gku642 |
Ejemplares similares
-
TRDB—The Tandem Repeats Database
por: Gelfand, Yevgeniy, et al.
Publicado: (2007) -
BitPAl: a bit-parallel, general integer-scoring sequence alignment algorithm
por: Loving, Joshua, et al.
Publicado: (2014) -
Repeat or not repeat?—Statistical validation of tandem repeat prediction in genomic sequences
por: Schaper, Elke, et al.
Publicado: (2012) -
Genome-wide analysis of tandem repeats in Tribolium castaneum genome reveals abundant and highly dynamic tandem repeat families with satellite DNA features in euchromatic chromosomal arms
por: Pavlek, Martina, et al.
Publicado: (2015) -
The distribution of inverted repeat sequences in the Saccharomyces cerevisiae genome
por: Strawbridge, Eva M., et al.
Publicado: (2010)