Cargando…

Genomic Distribution of H3K9me2 and DNA Methylation in a Maize Genome

DNA methylation and dimethylation of lysine 9 of histone H3 (H3K9me2) are two chromatin modifications that can be associated with gene expression or recombination rate. The maize genome provides a complex landscape of interspersed genes and transposons. The genome-wide distribution of DNA methylatio...

Descripción completa

Detalles Bibliográficos
Autores principales:	West, Patrick T., Li, Qing, Ji, Lexiang, Eichten, Steven R., Song, Jawon, Vaughn, Matthew W., Schmitz, Robert J., Springer, Nathan M.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2014
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4133378/ https://www.ncbi.nlm.nih.gov/pubmed/25122127 http://dx.doi.org/10.1371/journal.pone.0105267

Ejemplares similares

Minimal evidence for consistent changes in maize DNA methylation patterns following environmental stress
por: Eichten, Steven R., et al.
Publicado: (2015)

Subtle Perturbations of the Maize Methylome Reveal Genes and Transposons Silenced by Chromomethylase or RNA-Directed DNA Methylation Pathways
por: Anderson, Sarah N., et al.
Publicado: (2018)

Stability of DNA methylation and chromatin accessibility in structurally diverse maize genomes
por: Noshay, Jaclyn M, et al.
Publicado: (2021)

Evolutionary and functional genomics of DNA methylation in maize domestication and improvement
por: Xu, Gen, et al.
Publicado: (2020)

Monitoring the interplay between transposable element families and DNA methylation in maize
por: Noshay, Jaclyn M., et al.
Publicado: (2019)

Widespread Long-range Cis-Regulatory Elements in the Maize Genome
por: Ricci, William A., et al.
Publicado: (2019)

Spreading of Heterochromatin Is Limited to Specific Families of Maize Retrotransposons
por: Eichten, Steven R., et al.
Publicado: (2012)

The genomic ecosystem of transposable elements in maize
por: Stitzer, Michelle C., et al.
Publicado: (2021)

Genome-wide discovery and characterization of maize long non-coding RNAs
por: Li, Lin, et al.
Publicado: (2014)

Correction to: Genome-wide discovery and characterization of maize long non-coding RNAs
por: Li, Lin, et al.
Publicado: (2018)

Methylated DNA is over-represented in whole-genome bisulfite sequencing data
por: Ji, Lexiang, et al.
Publicado: (2014)

Heritable Epigenetic Variation among Maize Inbreds
por: Eichten, Steve R., et al.
Publicado: (2011)

Maternal H3K27me3 controls DNA methylation-independent genomic imprinting
por: Inoue, Azusa, et al.
Publicado: (2017)

The LSH/DDM1 Homolog MUS-30 Is Required for Genome Stability, but Not for DNA Methylation in Neurospora crassa
por: Basenko, Evelina Y., et al.
Publicado: (2016)

Monitoring Histone Methylation (H3K9me3) Changes in Live Cells
por: Sánchez, Oscar F., et al.
Publicado: (2019)

Molecular basis for histone H3 “K4me3-K9me3/2” methylation pattern readout by Spindlin1
por: Zhao, Fan, et al.
Publicado: (2021)

G9a/GLP-sensitivity of H3K9me2 Demarcates Two Types of Genomic Compartments
por: Yan, Zixiang, et al.
Publicado: (2020)

Relationship between Gene Body DNA Methylation and Intragenic H3K9me3 and H3K36me3 Chromatin Marks
por: Hahn, Maria A., et al.
Publicado: (2011)

Abo1 is required for the H3K9me2 to H3K9me3 transition in heterochromatin
por: Dong, Wenbo, et al.
Publicado: (2020)

Distribution of H3K27me3, H3K9me3, and H3K4me3 along autophagy-related genes highly expressed in starved zebrafish myotubes
por: Biga, Peggy R., et al.
Publicado: (2017)

Genome-wide identification of histone methylation (H3K9(me2)) and acetylation (H4K12(ac)) marks in two ecotypes of switchgrass (Panicum virgatum L.)
por: Ayyappan, Vasudevan, et al.
Publicado: (2019)

Distribution, functional impact, and origin mechanisms of copy number variation in the barley genome
por: Muñoz-Amatriaín, María, et al.
Publicado: (2013)

Arabidopsis AGDP1 links H3K9me2 to DNA methylation in heterochromatin
por: Zhang, Cuijun, et al.
Publicado: (2018)

Heterochromatic Genome Stability Requires Regulators of Histone H3 K9 Methylation
por: Peng, Jamy C., et al.
Publicado: (2009)

Genome-wide nucleotide patterns and potential mechanisms of genome divergence following domestication in maize and soybean
por: Wang, Jinyu, et al.
Publicado: (2019)

PRC2 and EHMT1 regulate H3K27me2 and H3K27me3 establishment across the zygote genome
por: Meng, Tie-Gang, et al.
Publicado: (2020)

The Novel Role of Zfp296 in Mammalian Embryonic Genome Activation as an H3K9me3 Modulator
por: Gao, Lu, et al.
Publicado: (2023)

Mapping responsive genomic elements to heat stress in a maize diversity panel
por: Liang, Zhikai, et al.
Publicado: (2022)

Dominant role of DNA methylation over H3K9me3 for IAP silencing in endoderm
por: Wang, Zeyang, et al.
Publicado: (2022)

Post-conversion targeted capture of modified cytosines in mammalian and plant genomes
por: Li, Qing, et al.
Publicado: (2015)

Genome-wide epigenetic cross-talk between DNA methylation and H3K27me3 in zebrafish embryos
por: de la Calle Mustienes, Elisa, et al.
Publicado: (2015)

H3K9me3-binding proteins are dispensable for SETDB1/H3K9me3-dependent retroviral silencing
por: Maksakova, Irina A, et al.
Publicado: (2011)

Genome-wide analysis of regulation of gene expression and H3K9me2 distribution by JIL-1 kinase mediated histone H3S10 phosphorylation in Drosophila
por: Cai, Weili, et al.
Publicado: (2014)

Genomic and Gene-Level Distribution of Histone H3 Dimethyl Lysine-27 (H3K27me2) in Arabidopsis
por: Park, Sunchung, et al.
Publicado: (2012)

Genomic imprinting of Xist by maternal H3K27me3
por: Inoue, Azusa, et al.
Publicado: (2017)

Unreprogrammed H3K9me3 prevents minor zygotic genome activation and lineage commitment in SCNT embryos
por: Xu, Ruimin, et al.
Publicado: (2023)

In Vivo Identification of H3K9me2/H3K79me3 as an Epigenetic Barrier to Carcinogenesis
por: Piro, Maria Cristina, et al.
Publicado: (2023)

Genome Wide Distribution of Linker Histone H1.0 is Independent of MeCP2
por: Ito-Ishida, Aya, et al.
Publicado: (2018)

H3K9me1/2 methylation limits the lifespan of daf-2 mutants in C. elegans
por: Huang, Meng, et al.
Publicado: (2022)

The Histone H3 K4me3, K27me3, and K27ac Genome-Wide Distributions Are Differently Influenced by Sex in Brain Cortexes and Gastrocnemius of the Alzheimer’s Disease PSAPP Mouse Model
por: Casciaro, Francesca, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_vi9d3cnasungivsfoda25ng5n3