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Genetic Alterations of Chromosome 8 Genes in Oral Cancer
The clinical relevance of DNA copy number alterations in chromosome 8 were investigated in oral cancers. The copy numbers of 30 selected genes in 33 OSCC patients were detected using the multiplex ligation-dependent probe amplification (MLPA) technique. Amplifications of the EIF3E gene were found in...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4133705/ https://www.ncbi.nlm.nih.gov/pubmed/25123227 http://dx.doi.org/10.1038/srep06073 |
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author | Yong, Zachary Wei Ern Zaini, Zuraiza Mohamad Kallarakkal, Thomas George Karen-Ng, Lee Peng Rahman, Zainal Ariff Abdul Ismail, Siti Mazlipah Sharifah, Noor Akmal Mustafa, Wan Mahadzir Wan Abraham, Mannil Thomas Tay, Keng Kiong Zain, Rosnah Binti |
author_facet | Yong, Zachary Wei Ern Zaini, Zuraiza Mohamad Kallarakkal, Thomas George Karen-Ng, Lee Peng Rahman, Zainal Ariff Abdul Ismail, Siti Mazlipah Sharifah, Noor Akmal Mustafa, Wan Mahadzir Wan Abraham, Mannil Thomas Tay, Keng Kiong Zain, Rosnah Binti |
author_sort | Yong, Zachary Wei Ern |
collection | PubMed |
description | The clinical relevance of DNA copy number alterations in chromosome 8 were investigated in oral cancers. The copy numbers of 30 selected genes in 33 OSCC patients were detected using the multiplex ligation-dependent probe amplification (MLPA) technique. Amplifications of the EIF3E gene were found in 27.3% of the patients, MYC in 18.2%, RECQL4 in 15.2% and MYBL1 in 12.1% of patients. The most frequent gene losses found were the GATA4 gene (24.2%), FGFR1 gene (24.2%), MSRA (21.2) and CSGALNACT1 (12.1%). The co-amplification of EIF3E and RECQL4 was found in 9% of patients and showed significant association with alcohol drinkers. There was a significant association between the amplification of EIF3E gene with non-betel quid chewers and the negative lymph node status. EIF3E amplifications did not show prognostic significance on survival. Our results suggest that EIF3E may have a role in the carcinogenesis of OSCC in non-betel quid chewers. |
format | Online Article Text |
id | pubmed-4133705 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-41337052014-08-18 Genetic Alterations of Chromosome 8 Genes in Oral Cancer Yong, Zachary Wei Ern Zaini, Zuraiza Mohamad Kallarakkal, Thomas George Karen-Ng, Lee Peng Rahman, Zainal Ariff Abdul Ismail, Siti Mazlipah Sharifah, Noor Akmal Mustafa, Wan Mahadzir Wan Abraham, Mannil Thomas Tay, Keng Kiong Zain, Rosnah Binti Sci Rep Article The clinical relevance of DNA copy number alterations in chromosome 8 were investigated in oral cancers. The copy numbers of 30 selected genes in 33 OSCC patients were detected using the multiplex ligation-dependent probe amplification (MLPA) technique. Amplifications of the EIF3E gene were found in 27.3% of the patients, MYC in 18.2%, RECQL4 in 15.2% and MYBL1 in 12.1% of patients. The most frequent gene losses found were the GATA4 gene (24.2%), FGFR1 gene (24.2%), MSRA (21.2) and CSGALNACT1 (12.1%). The co-amplification of EIF3E and RECQL4 was found in 9% of patients and showed significant association with alcohol drinkers. There was a significant association between the amplification of EIF3E gene with non-betel quid chewers and the negative lymph node status. EIF3E amplifications did not show prognostic significance on survival. Our results suggest that EIF3E may have a role in the carcinogenesis of OSCC in non-betel quid chewers. Nature Publishing Group 2014-08-15 /pmc/articles/PMC4133705/ /pubmed/25123227 http://dx.doi.org/10.1038/srep06073 Text en Copyright © 2014, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-nd/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder in order to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/4.0/ |
spellingShingle | Article Yong, Zachary Wei Ern Zaini, Zuraiza Mohamad Kallarakkal, Thomas George Karen-Ng, Lee Peng Rahman, Zainal Ariff Abdul Ismail, Siti Mazlipah Sharifah, Noor Akmal Mustafa, Wan Mahadzir Wan Abraham, Mannil Thomas Tay, Keng Kiong Zain, Rosnah Binti Genetic Alterations of Chromosome 8 Genes in Oral Cancer |
title | Genetic Alterations of Chromosome 8 Genes in Oral Cancer |
title_full | Genetic Alterations of Chromosome 8 Genes in Oral Cancer |
title_fullStr | Genetic Alterations of Chromosome 8 Genes in Oral Cancer |
title_full_unstemmed | Genetic Alterations of Chromosome 8 Genes in Oral Cancer |
title_short | Genetic Alterations of Chromosome 8 Genes in Oral Cancer |
title_sort | genetic alterations of chromosome 8 genes in oral cancer |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4133705/ https://www.ncbi.nlm.nih.gov/pubmed/25123227 http://dx.doi.org/10.1038/srep06073 |
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