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Polymorphisms in SPARC and Coal Workers' Pneumoconiosis Risk in a Chinese Population
BACKGROUND: The SPARC is a crucial matricellular protein and may influence the course of various diseases like tumor metastasis and fibrosis. In the present study, we investigated the association between the potential functional polymorphisms in SPARC and coal workers' pneumoconiosis (CWP) risk...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4134282/ https://www.ncbi.nlm.nih.gov/pubmed/25126876 http://dx.doi.org/10.1371/journal.pone.0105226 |
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author | Wang, Ting Yang, Jingjin Han, Ruhui Ji, Xiaoming Wu, Baiqun Han, Lei Luo, Chen Fan, Jingjing Zhu, Baoli Ni, Chunhui |
author_facet | Wang, Ting Yang, Jingjin Han, Ruhui Ji, Xiaoming Wu, Baiqun Han, Lei Luo, Chen Fan, Jingjing Zhu, Baoli Ni, Chunhui |
author_sort | Wang, Ting |
collection | PubMed |
description | BACKGROUND: The SPARC is a crucial matricellular protein and may influence the course of various diseases like tumor metastasis and fibrosis. In the present study, we investigated the association between the potential functional polymorphisms in SPARC and coal workers' pneumoconiosis (CWP) risk in a Chinese population. METHODS: Five potentially functional polymorphisms (rs1059279, rs1059829, rs1053411, rs2304052 and rs4958281) in SPARC were genotyped and analyzed in a case-control study including 697 CWP cases and 694 controls. The genotyping was used by the TaqMan method with the ABI 7900HT Real Time PCR system. RESULTS: Our results revealed that three SNPs (rs1059279, rs1059829, rs1053411) were significantly associated with increased risk of CWP under an additive model (OR = 1.35, 95%CI = 1.06–1.71, P = 0.015 for rs1059279; OR = 1.20, 95%CI = 1.03–1.39, P = 0.021 for rs1059829; OR = 1.31, 95%CI = 1.03–1.65, P = 0.025 for rs1053411). In the stratification analysis, significant associations were observed between each of these three SNPs and patients with 0–20 pack-years of smoking (OR = 1.73, 95%CI = 1.21–2.45 for rs1059279; OR = 1.48, 95%CI = 1.07–2.05 for rs105982; OR = 1.58, 95%CI = 1.13–2.22 for rs1053411). Furthermore, the association between rs1059279 and CWP risk remained significant among subjects with over 27 years of exposure (OR = 1.27, 95%CI = 1.03–1.56, P = 0.023). In the combined analysis of these five polymorphisms, individuals with multiple risk alleles had a higher risk of CWP (Ptrend = 0.015). CONCLUSION: Our results indicate that three functional SPARC SNPs are associated with an increased risk of CWP in a Chinese population. Further functional research and validation studies with diverse populations are warranted to confirm our findings. |
format | Online Article Text |
id | pubmed-4134282 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-41342822014-08-19 Polymorphisms in SPARC and Coal Workers' Pneumoconiosis Risk in a Chinese Population Wang, Ting Yang, Jingjin Han, Ruhui Ji, Xiaoming Wu, Baiqun Han, Lei Luo, Chen Fan, Jingjing Zhu, Baoli Ni, Chunhui PLoS One Research Article BACKGROUND: The SPARC is a crucial matricellular protein and may influence the course of various diseases like tumor metastasis and fibrosis. In the present study, we investigated the association between the potential functional polymorphisms in SPARC and coal workers' pneumoconiosis (CWP) risk in a Chinese population. METHODS: Five potentially functional polymorphisms (rs1059279, rs1059829, rs1053411, rs2304052 and rs4958281) in SPARC were genotyped and analyzed in a case-control study including 697 CWP cases and 694 controls. The genotyping was used by the TaqMan method with the ABI 7900HT Real Time PCR system. RESULTS: Our results revealed that three SNPs (rs1059279, rs1059829, rs1053411) were significantly associated with increased risk of CWP under an additive model (OR = 1.35, 95%CI = 1.06–1.71, P = 0.015 for rs1059279; OR = 1.20, 95%CI = 1.03–1.39, P = 0.021 for rs1059829; OR = 1.31, 95%CI = 1.03–1.65, P = 0.025 for rs1053411). In the stratification analysis, significant associations were observed between each of these three SNPs and patients with 0–20 pack-years of smoking (OR = 1.73, 95%CI = 1.21–2.45 for rs1059279; OR = 1.48, 95%CI = 1.07–2.05 for rs105982; OR = 1.58, 95%CI = 1.13–2.22 for rs1053411). Furthermore, the association between rs1059279 and CWP risk remained significant among subjects with over 27 years of exposure (OR = 1.27, 95%CI = 1.03–1.56, P = 0.023). In the combined analysis of these five polymorphisms, individuals with multiple risk alleles had a higher risk of CWP (Ptrend = 0.015). CONCLUSION: Our results indicate that three functional SPARC SNPs are associated with an increased risk of CWP in a Chinese population. Further functional research and validation studies with diverse populations are warranted to confirm our findings. Public Library of Science 2014-08-15 /pmc/articles/PMC4134282/ /pubmed/25126876 http://dx.doi.org/10.1371/journal.pone.0105226 Text en © 2014 Wang et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Wang, Ting Yang, Jingjin Han, Ruhui Ji, Xiaoming Wu, Baiqun Han, Lei Luo, Chen Fan, Jingjing Zhu, Baoli Ni, Chunhui Polymorphisms in SPARC and Coal Workers' Pneumoconiosis Risk in a Chinese Population |
title | Polymorphisms in SPARC and Coal Workers' Pneumoconiosis Risk in a Chinese Population |
title_full | Polymorphisms in SPARC and Coal Workers' Pneumoconiosis Risk in a Chinese Population |
title_fullStr | Polymorphisms in SPARC and Coal Workers' Pneumoconiosis Risk in a Chinese Population |
title_full_unstemmed | Polymorphisms in SPARC and Coal Workers' Pneumoconiosis Risk in a Chinese Population |
title_short | Polymorphisms in SPARC and Coal Workers' Pneumoconiosis Risk in a Chinese Population |
title_sort | polymorphisms in sparc and coal workers' pneumoconiosis risk in a chinese population |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4134282/ https://www.ncbi.nlm.nih.gov/pubmed/25126876 http://dx.doi.org/10.1371/journal.pone.0105226 |
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