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Analysis of proteins involved in the production of MAA׳s in two Cyanobacteria Synechocystis PCC 6803 and Anabaena cylindrica

Mycosporine- like amino acids (MAAs) are small (<400Da), colourless, water soluble compounds composed of cyclohexenone or cyclohexinimine chromophere conjugated with the nitrogen substituent of amino acid or its amino alcohol. These compounds are known for their UV- absorbing role in various orga...

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Autores principales: Rahman, Md Akhlaqur, Sinha, Sukrat, Sachan, Shephali, Kumar, Gaurav, Singh, Shailendra Kumar, Sundaram, Shanthy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Biomedical Informatics 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4135294/
https://www.ncbi.nlm.nih.gov/pubmed/25187686
http://dx.doi.org/10.6026/97320630010449
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author Rahman, Md Akhlaqur
Sinha, Sukrat
Sachan, Shephali
Kumar, Gaurav
Singh, Shailendra Kumar
Sundaram, Shanthy
author_facet Rahman, Md Akhlaqur
Sinha, Sukrat
Sachan, Shephali
Kumar, Gaurav
Singh, Shailendra Kumar
Sundaram, Shanthy
author_sort Rahman, Md Akhlaqur
collection PubMed
description Mycosporine- like amino acids (MAAs) are small (<400Da), colourless, water soluble compounds composed of cyclohexenone or cyclohexinimine chromophere conjugated with the nitrogen substituent of amino acid or its amino alcohol. These compounds are known for their UV- absorbing role in various organisms and seem to have evolutionary significance. The biosynthesis of MAAs is presumed to occur via the first part of shikimate pathway. In the present work two cyanobacteria Synechocystis PCC 6803 and Anabaena cylindrica were tested for their ability to synthesize MAAs and protein involved in the production of MAAs. It was found that protein sequence 3-phosphoshikimate 1-carboxyvinyltransferase is involved in producing mycosporine glycine in Synechocystis PCC 6803 and 3-dehydroquinate synthase is involved for producing shinorine in Anabaena cylindrica. Phylogenetic and bioinformatic analysis of Mycosporine like amino acid producing protein sequence of both cyanobacterial species Synechocystis PCC 6803 and Anabaena cylindrica provide a useful framework to understand the relationship of the different forms and how they have evolved from a common ancestor. These products seem to be conserved but the residues are prone to variation which might be due the fact that different cyanobacteria show different physiological process in response of Ultraviolet stress.
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spelling pubmed-41352942014-09-03 Analysis of proteins involved in the production of MAA׳s in two Cyanobacteria Synechocystis PCC 6803 and Anabaena cylindrica Rahman, Md Akhlaqur Sinha, Sukrat Sachan, Shephali Kumar, Gaurav Singh, Shailendra Kumar Sundaram, Shanthy Bioinformation Hypothesis Mycosporine- like amino acids (MAAs) are small (<400Da), colourless, water soluble compounds composed of cyclohexenone or cyclohexinimine chromophere conjugated with the nitrogen substituent of amino acid or its amino alcohol. These compounds are known for their UV- absorbing role in various organisms and seem to have evolutionary significance. The biosynthesis of MAAs is presumed to occur via the first part of shikimate pathway. In the present work two cyanobacteria Synechocystis PCC 6803 and Anabaena cylindrica were tested for their ability to synthesize MAAs and protein involved in the production of MAAs. It was found that protein sequence 3-phosphoshikimate 1-carboxyvinyltransferase is involved in producing mycosporine glycine in Synechocystis PCC 6803 and 3-dehydroquinate synthase is involved for producing shinorine in Anabaena cylindrica. Phylogenetic and bioinformatic analysis of Mycosporine like amino acid producing protein sequence of both cyanobacterial species Synechocystis PCC 6803 and Anabaena cylindrica provide a useful framework to understand the relationship of the different forms and how they have evolved from a common ancestor. These products seem to be conserved but the residues are prone to variation which might be due the fact that different cyanobacteria show different physiological process in response of Ultraviolet stress. Biomedical Informatics 2014-07-22 /pmc/articles/PMC4135294/ /pubmed/25187686 http://dx.doi.org/10.6026/97320630010449 Text en © 2014 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Hypothesis
Rahman, Md Akhlaqur
Sinha, Sukrat
Sachan, Shephali
Kumar, Gaurav
Singh, Shailendra Kumar
Sundaram, Shanthy
Analysis of proteins involved in the production of MAA׳s in two Cyanobacteria Synechocystis PCC 6803 and Anabaena cylindrica
title Analysis of proteins involved in the production of MAA׳s in two Cyanobacteria Synechocystis PCC 6803 and Anabaena cylindrica
title_full Analysis of proteins involved in the production of MAA׳s in two Cyanobacteria Synechocystis PCC 6803 and Anabaena cylindrica
title_fullStr Analysis of proteins involved in the production of MAA׳s in two Cyanobacteria Synechocystis PCC 6803 and Anabaena cylindrica
title_full_unstemmed Analysis of proteins involved in the production of MAA׳s in two Cyanobacteria Synechocystis PCC 6803 and Anabaena cylindrica
title_short Analysis of proteins involved in the production of MAA׳s in two Cyanobacteria Synechocystis PCC 6803 and Anabaena cylindrica
title_sort analysis of proteins involved in the production of maa׳s in two cyanobacteria synechocystis pcc 6803 and anabaena cylindrica
topic Hypothesis
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4135294/
https://www.ncbi.nlm.nih.gov/pubmed/25187686
http://dx.doi.org/10.6026/97320630010449
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