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A Discrete Wavelet Based Feature Extraction and Hybrid Classification Technique for Microarray Data Analysis

Cancer classification by doctors and radiologists was based on morphological and clinical features and had limited diagnostic ability in olden days. The recent arrival of DNA microarray technology has led to the concurrent monitoring of thousands of gene expressions in a single chip which stimulates...

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Autores principales: Bennet, Jaison, Arul Ganaprakasam, Chilambuchelvan, Arputharaj, Kannan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4138760/
https://www.ncbi.nlm.nih.gov/pubmed/25162043
http://dx.doi.org/10.1155/2014/195470
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author Bennet, Jaison
Arul Ganaprakasam, Chilambuchelvan
Arputharaj, Kannan
author_facet Bennet, Jaison
Arul Ganaprakasam, Chilambuchelvan
Arputharaj, Kannan
author_sort Bennet, Jaison
collection PubMed
description Cancer classification by doctors and radiologists was based on morphological and clinical features and had limited diagnostic ability in olden days. The recent arrival of DNA microarray technology has led to the concurrent monitoring of thousands of gene expressions in a single chip which stimulates the progress in cancer classification. In this paper, we have proposed a hybrid approach for microarray data classification based on nearest neighbor (KNN), naive Bayes, and support vector machine (SVM). Feature selection prior to classification plays a vital role and a feature selection technique which combines discrete wavelet transform (DWT) and moving window technique (MWT) is used. The performance of the proposed method is compared with the conventional classifiers like support vector machine, nearest neighbor, and naive Bayes. Experiments have been conducted on both real and benchmark datasets and the results indicate that the ensemble approach produces higher classification accuracy than conventional classifiers. This paper serves as an automated system for the classification of cancer and can be applied by doctors in real cases which serve as a boon to the medical community. This work further reduces the misclassification of cancers which is highly not allowed in cancer detection.
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spelling pubmed-41387602014-08-26 A Discrete Wavelet Based Feature Extraction and Hybrid Classification Technique for Microarray Data Analysis Bennet, Jaison Arul Ganaprakasam, Chilambuchelvan Arputharaj, Kannan ScientificWorldJournal Research Article Cancer classification by doctors and radiologists was based on morphological and clinical features and had limited diagnostic ability in olden days. The recent arrival of DNA microarray technology has led to the concurrent monitoring of thousands of gene expressions in a single chip which stimulates the progress in cancer classification. In this paper, we have proposed a hybrid approach for microarray data classification based on nearest neighbor (KNN), naive Bayes, and support vector machine (SVM). Feature selection prior to classification plays a vital role and a feature selection technique which combines discrete wavelet transform (DWT) and moving window technique (MWT) is used. The performance of the proposed method is compared with the conventional classifiers like support vector machine, nearest neighbor, and naive Bayes. Experiments have been conducted on both real and benchmark datasets and the results indicate that the ensemble approach produces higher classification accuracy than conventional classifiers. This paper serves as an automated system for the classification of cancer and can be applied by doctors in real cases which serve as a boon to the medical community. This work further reduces the misclassification of cancers which is highly not allowed in cancer detection. Hindawi Publishing Corporation 2014 2014-08-06 /pmc/articles/PMC4138760/ /pubmed/25162043 http://dx.doi.org/10.1155/2014/195470 Text en Copyright © 2014 Jaison Bennet et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Bennet, Jaison
Arul Ganaprakasam, Chilambuchelvan
Arputharaj, Kannan
A Discrete Wavelet Based Feature Extraction and Hybrid Classification Technique for Microarray Data Analysis
title A Discrete Wavelet Based Feature Extraction and Hybrid Classification Technique for Microarray Data Analysis
title_full A Discrete Wavelet Based Feature Extraction and Hybrid Classification Technique for Microarray Data Analysis
title_fullStr A Discrete Wavelet Based Feature Extraction and Hybrid Classification Technique for Microarray Data Analysis
title_full_unstemmed A Discrete Wavelet Based Feature Extraction and Hybrid Classification Technique for Microarray Data Analysis
title_short A Discrete Wavelet Based Feature Extraction and Hybrid Classification Technique for Microarray Data Analysis
title_sort discrete wavelet based feature extraction and hybrid classification technique for microarray data analysis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4138760/
https://www.ncbi.nlm.nih.gov/pubmed/25162043
http://dx.doi.org/10.1155/2014/195470
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