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A Discrete Wavelet Based Feature Extraction and Hybrid Classification Technique for Microarray Data Analysis
Cancer classification by doctors and radiologists was based on morphological and clinical features and had limited diagnostic ability in olden days. The recent arrival of DNA microarray technology has led to the concurrent monitoring of thousands of gene expressions in a single chip which stimulates...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4138760/ https://www.ncbi.nlm.nih.gov/pubmed/25162043 http://dx.doi.org/10.1155/2014/195470 |
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author | Bennet, Jaison Arul Ganaprakasam, Chilambuchelvan Arputharaj, Kannan |
author_facet | Bennet, Jaison Arul Ganaprakasam, Chilambuchelvan Arputharaj, Kannan |
author_sort | Bennet, Jaison |
collection | PubMed |
description | Cancer classification by doctors and radiologists was based on morphological and clinical features and had limited diagnostic ability in olden days. The recent arrival of DNA microarray technology has led to the concurrent monitoring of thousands of gene expressions in a single chip which stimulates the progress in cancer classification. In this paper, we have proposed a hybrid approach for microarray data classification based on nearest neighbor (KNN), naive Bayes, and support vector machine (SVM). Feature selection prior to classification plays a vital role and a feature selection technique which combines discrete wavelet transform (DWT) and moving window technique (MWT) is used. The performance of the proposed method is compared with the conventional classifiers like support vector machine, nearest neighbor, and naive Bayes. Experiments have been conducted on both real and benchmark datasets and the results indicate that the ensemble approach produces higher classification accuracy than conventional classifiers. This paper serves as an automated system for the classification of cancer and can be applied by doctors in real cases which serve as a boon to the medical community. This work further reduces the misclassification of cancers which is highly not allowed in cancer detection. |
format | Online Article Text |
id | pubmed-4138760 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-41387602014-08-26 A Discrete Wavelet Based Feature Extraction and Hybrid Classification Technique for Microarray Data Analysis Bennet, Jaison Arul Ganaprakasam, Chilambuchelvan Arputharaj, Kannan ScientificWorldJournal Research Article Cancer classification by doctors and radiologists was based on morphological and clinical features and had limited diagnostic ability in olden days. The recent arrival of DNA microarray technology has led to the concurrent monitoring of thousands of gene expressions in a single chip which stimulates the progress in cancer classification. In this paper, we have proposed a hybrid approach for microarray data classification based on nearest neighbor (KNN), naive Bayes, and support vector machine (SVM). Feature selection prior to classification plays a vital role and a feature selection technique which combines discrete wavelet transform (DWT) and moving window technique (MWT) is used. The performance of the proposed method is compared with the conventional classifiers like support vector machine, nearest neighbor, and naive Bayes. Experiments have been conducted on both real and benchmark datasets and the results indicate that the ensemble approach produces higher classification accuracy than conventional classifiers. This paper serves as an automated system for the classification of cancer and can be applied by doctors in real cases which serve as a boon to the medical community. This work further reduces the misclassification of cancers which is highly not allowed in cancer detection. Hindawi Publishing Corporation 2014 2014-08-06 /pmc/articles/PMC4138760/ /pubmed/25162043 http://dx.doi.org/10.1155/2014/195470 Text en Copyright © 2014 Jaison Bennet et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Bennet, Jaison Arul Ganaprakasam, Chilambuchelvan Arputharaj, Kannan A Discrete Wavelet Based Feature Extraction and Hybrid Classification Technique for Microarray Data Analysis |
title | A Discrete Wavelet Based Feature Extraction and Hybrid Classification Technique for Microarray Data Analysis |
title_full | A Discrete Wavelet Based Feature Extraction and Hybrid Classification Technique for Microarray Data Analysis |
title_fullStr | A Discrete Wavelet Based Feature Extraction and Hybrid Classification Technique for Microarray Data Analysis |
title_full_unstemmed | A Discrete Wavelet Based Feature Extraction and Hybrid Classification Technique for Microarray Data Analysis |
title_short | A Discrete Wavelet Based Feature Extraction and Hybrid Classification Technique for Microarray Data Analysis |
title_sort | discrete wavelet based feature extraction and hybrid classification technique for microarray data analysis |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4138760/ https://www.ncbi.nlm.nih.gov/pubmed/25162043 http://dx.doi.org/10.1155/2014/195470 |
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