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Separating morphologically similar pollen types using basic shape features from digital images: A preliminary study(1)
• Premise of the study: One of the many advantages offered by automated palynology systems is the ability to vastly increase the number of observations made on a particular sample or samples. This is of particular benefit when attempting to fully quantify the degree of variation within or between cl...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4141716/ https://www.ncbi.nlm.nih.gov/pubmed/25202650 http://dx.doi.org/10.3732/apps.1400032 |
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author | Holt, Katherine A. Bebbington, Mark S. |
author_facet | Holt, Katherine A. Bebbington, Mark S. |
author_sort | Holt, Katherine A. |
collection | PubMed |
description | • Premise of the study: One of the many advantages offered by automated palynology systems is the ability to vastly increase the number of observations made on a particular sample or samples. This is of particular benefit when attempting to fully quantify the degree of variation within or between closely related pollen types. • Methods: An automated palynology system (Classifynder) has been used to further investigate the variation in pollen morphology between two New Zealand species of Myrtaceae (Leptospermum scoparium and Kunzea ericoides) that are of significance in the New Zealand honey industry. Seven geometric features extracted from automatically gathered digital images were used to characterize the range of shape and size of the two taxa, and to examine the extent of previously reported overlap in these variables. • Results: Our results indicate a degree of overlap in all cases. The narrowest overlap was in measurements of maximum Feret diameter (MFD) in grains oriented in polar view. Multivariate statistical analysis using all seven factors provided the most robust discrimination between the two types. • Discussion: Further work is required before this approach could be routinely applied to separating the two pollen types used in this study, most notably the development of comprehensive reference distributions for the types in question. |
format | Online Article Text |
id | pubmed-4141716 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-41417162014-09-08 Separating morphologically similar pollen types using basic shape features from digital images: A preliminary study(1) Holt, Katherine A. Bebbington, Mark S. Appl Plant Sci Application Article • Premise of the study: One of the many advantages offered by automated palynology systems is the ability to vastly increase the number of observations made on a particular sample or samples. This is of particular benefit when attempting to fully quantify the degree of variation within or between closely related pollen types. • Methods: An automated palynology system (Classifynder) has been used to further investigate the variation in pollen morphology between two New Zealand species of Myrtaceae (Leptospermum scoparium and Kunzea ericoides) that are of significance in the New Zealand honey industry. Seven geometric features extracted from automatically gathered digital images were used to characterize the range of shape and size of the two taxa, and to examine the extent of previously reported overlap in these variables. • Results: Our results indicate a degree of overlap in all cases. The narrowest overlap was in measurements of maximum Feret diameter (MFD) in grains oriented in polar view. Multivariate statistical analysis using all seven factors provided the most robust discrimination between the two types. • Discussion: Further work is required before this approach could be routinely applied to separating the two pollen types used in this study, most notably the development of comprehensive reference distributions for the types in question. Botanical Society of America 2014-08-18 /pmc/articles/PMC4141716/ /pubmed/25202650 http://dx.doi.org/10.3732/apps.1400032 Text en © 2014 Holt and Bebbington. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA). |
spellingShingle | Application Article Holt, Katherine A. Bebbington, Mark S. Separating morphologically similar pollen types using basic shape features from digital images: A preliminary study(1) |
title | Separating morphologically similar pollen types using basic shape features from digital images: A preliminary study(1) |
title_full | Separating morphologically similar pollen types using basic shape features from digital images: A preliminary study(1) |
title_fullStr | Separating morphologically similar pollen types using basic shape features from digital images: A preliminary study(1) |
title_full_unstemmed | Separating morphologically similar pollen types using basic shape features from digital images: A preliminary study(1) |
title_short | Separating morphologically similar pollen types using basic shape features from digital images: A preliminary study(1) |
title_sort | separating morphologically similar pollen types using basic shape features from digital images: a preliminary study(1) |
topic | Application Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4141716/ https://www.ncbi.nlm.nih.gov/pubmed/25202650 http://dx.doi.org/10.3732/apps.1400032 |
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