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Independent Components of Neural Activity Carry Information on Individual Populations
Local field potential (LFP), the low-frequency part of the potential recorded extracellularly in the brain, reflects neural activity at the population level. The interpretation of LFP is complicated because it can mix activity from remote cells, on the order of millimeters from the electrode. To und...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4143226/ https://www.ncbi.nlm.nih.gov/pubmed/25153730 http://dx.doi.org/10.1371/journal.pone.0105071 |
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author | Głąbska, Helena Potworowski, Jan Łęski, Szymon Wójcik, Daniel K. |
author_facet | Głąbska, Helena Potworowski, Jan Łęski, Szymon Wójcik, Daniel K. |
author_sort | Głąbska, Helena |
collection | PubMed |
description | Local field potential (LFP), the low-frequency part of the potential recorded extracellularly in the brain, reflects neural activity at the population level. The interpretation of LFP is complicated because it can mix activity from remote cells, on the order of millimeters from the electrode. To understand better the relation between the recordings and the local activity of cells we used a large-scale network thalamocortical model to compute simultaneous LFP, transmembrane currents, and spiking activity. We used this model to study the information contained in independent components obtained from the reconstructed Current Source Density (CSD), which smooths transmembrane currents, decomposed further with Independent Component Analysis (ICA). We found that the three most robust components matched well the activity of two dominating cell populations: superior pyramidal cells in layer 2/3 (rhythmic spiking) and tufted pyramids from layer 5 (intrinsically bursting). The pyramidal population from layer 2/3 could not be well described as a product of spatial profile and temporal activation, but by a sum of two such products which we recovered in two of the ICA components in our analysis, which correspond to the two first principal components of PCA decomposition of layer 2/3 population activity. At low noise one more cell population could be discerned but it is unlikely that it could be recovered in experiment given typical noise ranges. |
format | Online Article Text |
id | pubmed-4143226 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-41432262014-08-27 Independent Components of Neural Activity Carry Information on Individual Populations Głąbska, Helena Potworowski, Jan Łęski, Szymon Wójcik, Daniel K. PLoS One Research Article Local field potential (LFP), the low-frequency part of the potential recorded extracellularly in the brain, reflects neural activity at the population level. The interpretation of LFP is complicated because it can mix activity from remote cells, on the order of millimeters from the electrode. To understand better the relation between the recordings and the local activity of cells we used a large-scale network thalamocortical model to compute simultaneous LFP, transmembrane currents, and spiking activity. We used this model to study the information contained in independent components obtained from the reconstructed Current Source Density (CSD), which smooths transmembrane currents, decomposed further with Independent Component Analysis (ICA). We found that the three most robust components matched well the activity of two dominating cell populations: superior pyramidal cells in layer 2/3 (rhythmic spiking) and tufted pyramids from layer 5 (intrinsically bursting). The pyramidal population from layer 2/3 could not be well described as a product of spatial profile and temporal activation, but by a sum of two such products which we recovered in two of the ICA components in our analysis, which correspond to the two first principal components of PCA decomposition of layer 2/3 population activity. At low noise one more cell population could be discerned but it is unlikely that it could be recovered in experiment given typical noise ranges. Public Library of Science 2014-08-25 /pmc/articles/PMC4143226/ /pubmed/25153730 http://dx.doi.org/10.1371/journal.pone.0105071 Text en © 2014 Głąbska et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Głąbska, Helena Potworowski, Jan Łęski, Szymon Wójcik, Daniel K. Independent Components of Neural Activity Carry Information on Individual Populations |
title | Independent Components of Neural Activity Carry Information on Individual Populations |
title_full | Independent Components of Neural Activity Carry Information on Individual Populations |
title_fullStr | Independent Components of Neural Activity Carry Information on Individual Populations |
title_full_unstemmed | Independent Components of Neural Activity Carry Information on Individual Populations |
title_short | Independent Components of Neural Activity Carry Information on Individual Populations |
title_sort | independent components of neural activity carry information on individual populations |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4143226/ https://www.ncbi.nlm.nih.gov/pubmed/25153730 http://dx.doi.org/10.1371/journal.pone.0105071 |
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