Cargando…

The glassy state of crambin and the THz time scale protein-solvent fluctuations possibly related to protein function

BACKGROUND: THz experiments have been used to characterize the picosecond time scale fluctuations taking place in the model, globular protein crambin. RESULTS: Using both hydration and temperature as an experimental parameter, we have identified collective fluctuations (<= 200 cm(−1)) in the prot...

Descripción completa

Detalles Bibliográficos
Autor principal: Woods, Kristina N
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4143578/
https://www.ncbi.nlm.nih.gov/pubmed/25184036
http://dx.doi.org/10.1186/s13628-014-0008-0
_version_ 1782331915357913088
author Woods, Kristina N
author_facet Woods, Kristina N
author_sort Woods, Kristina N
collection PubMed
description BACKGROUND: THz experiments have been used to characterize the picosecond time scale fluctuations taking place in the model, globular protein crambin. RESULTS: Using both hydration and temperature as an experimental parameter, we have identified collective fluctuations (<= 200 cm(−1)) in the protein. Observation of the protein dynamics in the THz spectrum from both below and above the glass transition temperature (T(g)) has provided unique insight into the microscopic interactions and modes that permit the solvent to effectively couple to the protein thermal fluctuations. CONCLUSIONS: Our findings suggest that the solvent dynamics on the picosecond time scale not only contribute to protein flexibility but may also delineate the types of fluctuations that are able to form within the protein structure.
format Online
Article
Text
id pubmed-4143578
institution National Center for Biotechnology Information
language English
publishDate 2014
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-41435782014-09-02 The glassy state of crambin and the THz time scale protein-solvent fluctuations possibly related to protein function Woods, Kristina N BMC Biophys Research Article BACKGROUND: THz experiments have been used to characterize the picosecond time scale fluctuations taking place in the model, globular protein crambin. RESULTS: Using both hydration and temperature as an experimental parameter, we have identified collective fluctuations (<= 200 cm(−1)) in the protein. Observation of the protein dynamics in the THz spectrum from both below and above the glass transition temperature (T(g)) has provided unique insight into the microscopic interactions and modes that permit the solvent to effectively couple to the protein thermal fluctuations. CONCLUSIONS: Our findings suggest that the solvent dynamics on the picosecond time scale not only contribute to protein flexibility but may also delineate the types of fluctuations that are able to form within the protein structure. BioMed Central 2014-08-16 /pmc/articles/PMC4143578/ /pubmed/25184036 http://dx.doi.org/10.1186/s13628-014-0008-0 Text en Copyright © 2014 Woods; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/4.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Woods, Kristina N
The glassy state of crambin and the THz time scale protein-solvent fluctuations possibly related to protein function
title The glassy state of crambin and the THz time scale protein-solvent fluctuations possibly related to protein function
title_full The glassy state of crambin and the THz time scale protein-solvent fluctuations possibly related to protein function
title_fullStr The glassy state of crambin and the THz time scale protein-solvent fluctuations possibly related to protein function
title_full_unstemmed The glassy state of crambin and the THz time scale protein-solvent fluctuations possibly related to protein function
title_short The glassy state of crambin and the THz time scale protein-solvent fluctuations possibly related to protein function
title_sort glassy state of crambin and the thz time scale protein-solvent fluctuations possibly related to protein function
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4143578/
https://www.ncbi.nlm.nih.gov/pubmed/25184036
http://dx.doi.org/10.1186/s13628-014-0008-0
work_keys_str_mv AT woodskristinan theglassystateofcrambinandthethztimescaleproteinsolventfluctuationspossiblyrelatedtoproteinfunction
AT woodskristinan glassystateofcrambinandthethztimescaleproteinsolventfluctuationspossiblyrelatedtoproteinfunction