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A powerful statistical method identifies novel loci associated with diastolic blood pressure triggered by nonlinear gene-environment interaction

The genetic basis of blood pressure often involves multiple genetic factors and their interactions with environmental factors. Gene-environment interaction is assumed to play an important role in determining individual blood pressure variability. Older people are more prone to high blood pressure th...

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Autores principales: Wang, Honglang, He, Tao, Wu, Cen, Zhong, Ping-Shou, Cui, Yuehua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4143702/
https://www.ncbi.nlm.nih.gov/pubmed/25519336
http://dx.doi.org/10.1186/1753-6561-8-S1-S61
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author Wang, Honglang
He, Tao
Wu, Cen
Zhong, Ping-Shou
Cui, Yuehua
author_facet Wang, Honglang
He, Tao
Wu, Cen
Zhong, Ping-Shou
Cui, Yuehua
author_sort Wang, Honglang
collection PubMed
description The genetic basis of blood pressure often involves multiple genetic factors and their interactions with environmental factors. Gene-environment interaction is assumed to play an important role in determining individual blood pressure variability. Older people are more prone to high blood pressure than younger ones and the risk may not display a linear trend over the life span. However, which gene shows sensitivity to aging in its effect on blood pressure is not clear. In this work, we allowed the genetic effect to vary over time and propose a varying-coefficient model to identify potential genetic players that show nonlinear response across different age stages. We detected 2 novel loci, gene MIR1263 (a microRNA coding gene) on chromosome 3 and gene UNC13B on chromosome 9, that are nonlinearly associated with diastolic blood pressure. Further experimental validation is needed to confirm this finding.
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spelling pubmed-41437022014-09-02 A powerful statistical method identifies novel loci associated with diastolic blood pressure triggered by nonlinear gene-environment interaction Wang, Honglang He, Tao Wu, Cen Zhong, Ping-Shou Cui, Yuehua BMC Proc Proceedings The genetic basis of blood pressure often involves multiple genetic factors and their interactions with environmental factors. Gene-environment interaction is assumed to play an important role in determining individual blood pressure variability. Older people are more prone to high blood pressure than younger ones and the risk may not display a linear trend over the life span. However, which gene shows sensitivity to aging in its effect on blood pressure is not clear. In this work, we allowed the genetic effect to vary over time and propose a varying-coefficient model to identify potential genetic players that show nonlinear response across different age stages. We detected 2 novel loci, gene MIR1263 (a microRNA coding gene) on chromosome 3 and gene UNC13B on chromosome 9, that are nonlinearly associated with diastolic blood pressure. Further experimental validation is needed to confirm this finding. BioMed Central 2014-06-17 /pmc/articles/PMC4143702/ /pubmed/25519336 http://dx.doi.org/10.1186/1753-6561-8-S1-S61 Text en Copyright © 2014 Wang et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Proceedings
Wang, Honglang
He, Tao
Wu, Cen
Zhong, Ping-Shou
Cui, Yuehua
A powerful statistical method identifies novel loci associated with diastolic blood pressure triggered by nonlinear gene-environment interaction
title A powerful statistical method identifies novel loci associated with diastolic blood pressure triggered by nonlinear gene-environment interaction
title_full A powerful statistical method identifies novel loci associated with diastolic blood pressure triggered by nonlinear gene-environment interaction
title_fullStr A powerful statistical method identifies novel loci associated with diastolic blood pressure triggered by nonlinear gene-environment interaction
title_full_unstemmed A powerful statistical method identifies novel loci associated with diastolic blood pressure triggered by nonlinear gene-environment interaction
title_short A powerful statistical method identifies novel loci associated with diastolic blood pressure triggered by nonlinear gene-environment interaction
title_sort powerful statistical method identifies novel loci associated with diastolic blood pressure triggered by nonlinear gene-environment interaction
topic Proceedings
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4143702/
https://www.ncbi.nlm.nih.gov/pubmed/25519336
http://dx.doi.org/10.1186/1753-6561-8-S1-S61
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