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A powerful statistical method identifies novel loci associated with diastolic blood pressure triggered by nonlinear gene-environment interaction
The genetic basis of blood pressure often involves multiple genetic factors and their interactions with environmental factors. Gene-environment interaction is assumed to play an important role in determining individual blood pressure variability. Older people are more prone to high blood pressure th...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4143702/ https://www.ncbi.nlm.nih.gov/pubmed/25519336 http://dx.doi.org/10.1186/1753-6561-8-S1-S61 |
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author | Wang, Honglang He, Tao Wu, Cen Zhong, Ping-Shou Cui, Yuehua |
author_facet | Wang, Honglang He, Tao Wu, Cen Zhong, Ping-Shou Cui, Yuehua |
author_sort | Wang, Honglang |
collection | PubMed |
description | The genetic basis of blood pressure often involves multiple genetic factors and their interactions with environmental factors. Gene-environment interaction is assumed to play an important role in determining individual blood pressure variability. Older people are more prone to high blood pressure than younger ones and the risk may not display a linear trend over the life span. However, which gene shows sensitivity to aging in its effect on blood pressure is not clear. In this work, we allowed the genetic effect to vary over time and propose a varying-coefficient model to identify potential genetic players that show nonlinear response across different age stages. We detected 2 novel loci, gene MIR1263 (a microRNA coding gene) on chromosome 3 and gene UNC13B on chromosome 9, that are nonlinearly associated with diastolic blood pressure. Further experimental validation is needed to confirm this finding. |
format | Online Article Text |
id | pubmed-4143702 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-41437022014-09-02 A powerful statistical method identifies novel loci associated with diastolic blood pressure triggered by nonlinear gene-environment interaction Wang, Honglang He, Tao Wu, Cen Zhong, Ping-Shou Cui, Yuehua BMC Proc Proceedings The genetic basis of blood pressure often involves multiple genetic factors and their interactions with environmental factors. Gene-environment interaction is assumed to play an important role in determining individual blood pressure variability. Older people are more prone to high blood pressure than younger ones and the risk may not display a linear trend over the life span. However, which gene shows sensitivity to aging in its effect on blood pressure is not clear. In this work, we allowed the genetic effect to vary over time and propose a varying-coefficient model to identify potential genetic players that show nonlinear response across different age stages. We detected 2 novel loci, gene MIR1263 (a microRNA coding gene) on chromosome 3 and gene UNC13B on chromosome 9, that are nonlinearly associated with diastolic blood pressure. Further experimental validation is needed to confirm this finding. BioMed Central 2014-06-17 /pmc/articles/PMC4143702/ /pubmed/25519336 http://dx.doi.org/10.1186/1753-6561-8-S1-S61 Text en Copyright © 2014 Wang et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Proceedings Wang, Honglang He, Tao Wu, Cen Zhong, Ping-Shou Cui, Yuehua A powerful statistical method identifies novel loci associated with diastolic blood pressure triggered by nonlinear gene-environment interaction |
title | A powerful statistical method identifies novel loci associated with diastolic blood
pressure triggered by nonlinear gene-environment interaction |
title_full | A powerful statistical method identifies novel loci associated with diastolic blood
pressure triggered by nonlinear gene-environment interaction |
title_fullStr | A powerful statistical method identifies novel loci associated with diastolic blood
pressure triggered by nonlinear gene-environment interaction |
title_full_unstemmed | A powerful statistical method identifies novel loci associated with diastolic blood
pressure triggered by nonlinear gene-environment interaction |
title_short | A powerful statistical method identifies novel loci associated with diastolic blood
pressure triggered by nonlinear gene-environment interaction |
title_sort | powerful statistical method identifies novel loci associated with diastolic blood
pressure triggered by nonlinear gene-environment interaction |
topic | Proceedings |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4143702/ https://www.ncbi.nlm.nih.gov/pubmed/25519336 http://dx.doi.org/10.1186/1753-6561-8-S1-S61 |
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