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Complete Mitochondrial Genome of Eruca sativa Mill. (Garden Rocket)
Eruca sativa (Cruciferae family) is an ancient crop of great economic and agronomic importance. Here, the complete mitochondrial genome of Eruca sativa was sequenced and annotated. The circular molecule is 247 696 bp long, with a G+C content of 45.07%, containing 33 protein-coding genes, three rRNA...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4144905/ https://www.ncbi.nlm.nih.gov/pubmed/25157569 http://dx.doi.org/10.1371/journal.pone.0105748 |
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author | Wang, Yankun Chu, Pu Yang, Qing Chang, Shengxin Chen, Jianmei Hu, Maolong Guan, Rongzhan |
author_facet | Wang, Yankun Chu, Pu Yang, Qing Chang, Shengxin Chen, Jianmei Hu, Maolong Guan, Rongzhan |
author_sort | Wang, Yankun |
collection | PubMed |
description | Eruca sativa (Cruciferae family) is an ancient crop of great economic and agronomic importance. Here, the complete mitochondrial genome of Eruca sativa was sequenced and annotated. The circular molecule is 247 696 bp long, with a G+C content of 45.07%, containing 33 protein-coding genes, three rRNA genes, and 18 tRNA genes. The Eruca sativa mitochondrial genome may be divided into six master circles and four subgenomic molecules via three pairwise large repeats, resulting in a more dynamic structure of the Eruca sativa mtDNA compared with other cruciferous mitotypes. Comparison with the Brassica napus MtDNA revealed that most of the genes with known function are conserved between these two mitotypes except for the ccmFN2 and rrn18 genes, and 27 point mutations were scattered in the 14 protein-coding genes. Evolutionary relationships analysis suggested that Eruca sativa is more closely related to the Brassica species and to Raphanus sativus than to Arabidopsis thaliana. |
format | Online Article Text |
id | pubmed-4144905 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-41449052014-08-29 Complete Mitochondrial Genome of Eruca sativa Mill. (Garden Rocket) Wang, Yankun Chu, Pu Yang, Qing Chang, Shengxin Chen, Jianmei Hu, Maolong Guan, Rongzhan PLoS One Research Article Eruca sativa (Cruciferae family) is an ancient crop of great economic and agronomic importance. Here, the complete mitochondrial genome of Eruca sativa was sequenced and annotated. The circular molecule is 247 696 bp long, with a G+C content of 45.07%, containing 33 protein-coding genes, three rRNA genes, and 18 tRNA genes. The Eruca sativa mitochondrial genome may be divided into six master circles and four subgenomic molecules via three pairwise large repeats, resulting in a more dynamic structure of the Eruca sativa mtDNA compared with other cruciferous mitotypes. Comparison with the Brassica napus MtDNA revealed that most of the genes with known function are conserved between these two mitotypes except for the ccmFN2 and rrn18 genes, and 27 point mutations were scattered in the 14 protein-coding genes. Evolutionary relationships analysis suggested that Eruca sativa is more closely related to the Brassica species and to Raphanus sativus than to Arabidopsis thaliana. Public Library of Science 2014-08-26 /pmc/articles/PMC4144905/ /pubmed/25157569 http://dx.doi.org/10.1371/journal.pone.0105748 Text en © 2014 Wang et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Wang, Yankun Chu, Pu Yang, Qing Chang, Shengxin Chen, Jianmei Hu, Maolong Guan, Rongzhan Complete Mitochondrial Genome of Eruca sativa Mill. (Garden Rocket) |
title | Complete Mitochondrial Genome of Eruca sativa Mill. (Garden Rocket) |
title_full | Complete Mitochondrial Genome of Eruca sativa Mill. (Garden Rocket) |
title_fullStr | Complete Mitochondrial Genome of Eruca sativa Mill. (Garden Rocket) |
title_full_unstemmed | Complete Mitochondrial Genome of Eruca sativa Mill. (Garden Rocket) |
title_short | Complete Mitochondrial Genome of Eruca sativa Mill. (Garden Rocket) |
title_sort | complete mitochondrial genome of eruca sativa mill. (garden rocket) |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4144905/ https://www.ncbi.nlm.nih.gov/pubmed/25157569 http://dx.doi.org/10.1371/journal.pone.0105748 |
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