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An Exploration of Evolution, Maturation, Expression and Function Relationships in Mir-23∼27∼24 Cluster
The study aims to explore the potential relationships of evolution, maturation, expression and function between homologous/clustered miRNAs. mir-23∼27∼24 gene cluster, including the two gene clusters (mir-23a and mir-23b) and the three miRNA gene families (mir-23, mir-27 and mir-24), was typically s...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4144971/ https://www.ncbi.nlm.nih.gov/pubmed/25157521 http://dx.doi.org/10.1371/journal.pone.0106223 |
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author | Liang, Tingming Yu, JiaFeng Liu, Chang Guo, Li |
author_facet | Liang, Tingming Yu, JiaFeng Liu, Chang Guo, Li |
author_sort | Liang, Tingming |
collection | PubMed |
description | The study aims to explore the potential relationships of evolution, maturation, expression and function between homologous/clustered miRNAs. mir-23∼27∼24 gene cluster, including the two gene clusters (mir-23a and mir-23b) and the three miRNA gene families (mir-23, mir-27 and mir-24), was typically selected as an example. These related miRNAs show similar evolutionary patterns and various expression patterns. Most of them show consistent isomiR expression pattern, and the “switching” phenomenon can be found between different abundant isomiR species. These findings suggest that these sequence or location related miRNAs show the similar miRNA processing and maturation processes, and the robust selection of the most dominant isomiR exists in specific tissues. Functional analysis show that these miRNAs show similar distributions of enriched gene categories, suggesting the close functional prelateships via direct or indirect coordinate regulation in biological processes. The study reveals the close evolutionary, expression and functional relationships between related homologous/clustered miRNAs, which will further enrich miRNA studies and understand direct or indirect interactions between miRNAs. |
format | Online Article Text |
id | pubmed-4144971 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-41449712014-08-29 An Exploration of Evolution, Maturation, Expression and Function Relationships in Mir-23∼27∼24 Cluster Liang, Tingming Yu, JiaFeng Liu, Chang Guo, Li PLoS One Research Article The study aims to explore the potential relationships of evolution, maturation, expression and function between homologous/clustered miRNAs. mir-23∼27∼24 gene cluster, including the two gene clusters (mir-23a and mir-23b) and the three miRNA gene families (mir-23, mir-27 and mir-24), was typically selected as an example. These related miRNAs show similar evolutionary patterns and various expression patterns. Most of them show consistent isomiR expression pattern, and the “switching” phenomenon can be found between different abundant isomiR species. These findings suggest that these sequence or location related miRNAs show the similar miRNA processing and maturation processes, and the robust selection of the most dominant isomiR exists in specific tissues. Functional analysis show that these miRNAs show similar distributions of enriched gene categories, suggesting the close functional prelateships via direct or indirect coordinate regulation in biological processes. The study reveals the close evolutionary, expression and functional relationships between related homologous/clustered miRNAs, which will further enrich miRNA studies and understand direct or indirect interactions between miRNAs. Public Library of Science 2014-08-26 /pmc/articles/PMC4144971/ /pubmed/25157521 http://dx.doi.org/10.1371/journal.pone.0106223 Text en © 2014 Liang et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Liang, Tingming Yu, JiaFeng Liu, Chang Guo, Li An Exploration of Evolution, Maturation, Expression and Function Relationships in Mir-23∼27∼24 Cluster |
title | An Exploration of Evolution, Maturation, Expression and Function Relationships in Mir-23∼27∼24 Cluster |
title_full | An Exploration of Evolution, Maturation, Expression and Function Relationships in Mir-23∼27∼24 Cluster |
title_fullStr | An Exploration of Evolution, Maturation, Expression and Function Relationships in Mir-23∼27∼24 Cluster |
title_full_unstemmed | An Exploration of Evolution, Maturation, Expression and Function Relationships in Mir-23∼27∼24 Cluster |
title_short | An Exploration of Evolution, Maturation, Expression and Function Relationships in Mir-23∼27∼24 Cluster |
title_sort | exploration of evolution, maturation, expression and function relationships in mir-23∼27∼24 cluster |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4144971/ https://www.ncbi.nlm.nih.gov/pubmed/25157521 http://dx.doi.org/10.1371/journal.pone.0106223 |
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